Basic Information:

  VIRBase ID:  

VHID00084844

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H3-3p:  MIMAT0008400          DUOX2:  NM_001363711     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H3-3p	DUOX2
miRBase Accession/Entrez ID	MIMAT0008400	50506
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	LNOX2//NOXEF2//P138-TOX//TDH6//THOX2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DUOX2	chr15:45386367(-) A-I      NonSyn:His->Arg chr15:45401092(-) A-I      Syn:Gln->Gln

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DUOX2	chr15:45385157-45385158(-) m6A 3'UTR       27773535 chr15:45385192-45385193(-) m6A 3'UTR       27773535 chr15:45385762-45385763(-) m6A 3'UTR       27773535 chr15:45385768-45385769(-) m6A 3'UTR       27773535 chr15:45386028-45386029(-) m6A 3'UTR       27773535 chr15:45386083-45386084(-) m6A 3'UTR       27773535 chr15:45386161-45386162(-) m6A 3'UTR       27773535 chr15:45386190-45386191(-) m6A 3'UTR       27773535 chr15:45386854-45386855(-) m6A CDS       27773535 chr15:45387144-45387145(-) m6A CDS       27773535 chr15:45387200-45387201(-) m6A CDS       27773535 chr15:45406176-45406177(-) m6A 5'UTR       27773535 chr15:45406193-45406194(-) m6A 5'UTR       27773535 chr15:45406201-45406202(-) m6A 5'UTR       27773535 chr15:45406316-45406317(-) m6A 5'UTR       27773535 chr15:45406323-45406324(-) m6A 5'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	DUOX2	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H3-3p
Interactor2: DUOX2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg