Basic Information:

  VIRBase ID:  

VHID00084288

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H3-3p:  MIMAT0008400          TIMM17B:  NM_005834     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H3-3p	TIMM17B
miRBase Accession/Entrez ID	MIMAT0008400	10245
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	DXS9822//JM3//TIM17B

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TIMM17B	chrX:48753575(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TIMM17B	chrX:48750921-48750922(-) m6A 3'UTR//exon       27773535//22575960 chrX:48751081-48751082(-) m6A 3'UTR//CDS//exon       27773535 chrX:48754393-48754394(-) m6A exon//intron       25456834//24981863 chrX:48754895-48754896(-) m6A 5'UTR//intron       25456834//24981863 chrX:48754904-48754905(-) m6A 5'UTR//intron       25456834//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TIMM17B	Cytosol K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H3-3p
Interactor2: TIMM17B

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg