Basic Information:

  VIRBase ID:  

VHID00084010

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H3-3p:  MIMAT0008400          IQGAP1:  NM_003870     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H3-3p	IQGAP1
miRBase Accession/Entrez ID	MIMAT0008400	8826
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HUMORFA01//p195//SAR1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	IQGAP1	chr15:91031299(+) A-I      intronic chr15:91031378(+) A-I      intronic chr15:91031374(+) A-I      intronic chr15:91031370(+) A-I      intronic chr15:91031365(+) A-I      intronic chr15:91031349(+) A-I      intronic chr15:91031342(+) A-I      intronic chr15:91031306(+) A-I      intronic chr15:91031303(+) A-I      intronic chr15:91011321(+) A-I      intronic chr15:91011913(+) A-I      intronic chr15:90971383(+) A-I      intronic chr15:90982050(+) A-I      intronic chr15:90971404(+) A-I      intronic chr15:91018171(+) A-I      intronic chr15:90980982(+) A-I      intronic chr15:91018142(+) A-I      intronic chr15:90981006(+) A-I      intronic chr15:90981010(+) A-I      intronic chr15:90981036(+) A-I      intronic chr15:91031287(+) A-I      intronic chr15:91031403(+) A-I      intronic chr15:91008962(+) A-I      intronic chr15:91031269(+) A-I      intronic chr15:91018881(+) A-I      intronic chr15:91018831(+) A-I      intronic chr15:90987738(+) A-I      intronic chr15:90987763(+) A-I      intronic chr15:91018199(+) A-I      intronic chr15:90980992(+) A-I      intronic chr15:91004875(+) A-I      intronic chr15:91004541(+) A-I      intronic chr15:91004420(+) A-I      intronic chr15:91000955(+) A-I      intronic chr15:91000785(+) A-I      intronic chr15:91000762(+) A-I      intronic chr15:91000759(+) A-I      intronic chr15:90970897(+) A-I      intronic chr15:90968435(+) A-I      intronic chr15:90970703(+) A-I      intronic chr15:90970926(+) A-I      intronic chr15:90971323(+) A-I      intronic chr15:90971405(+) A-I      intronic chr15:90971417(+) A-I      intronic chr15:90971434(+) A-I      intronic chr15:90971736(+) A-I      intronic chr15:90972102(+) A-I      intronic chr15:90972179(+) A-I      intronic chr15:90977414(+) A-I      intronic chr15:90977520(+) A-I      intronic chr15:90977523(+) A-I      intronic chr15:90977550(+) A-I      intronic chr15:90978623(+) A-I      intronic chr15:90978627(+) A-I      intronic chr15:90980875(+) A-I      intronic chr15:90980898(+) A-I      intronic chr15:90982010(+) A-I      intronic chr15:90985986(+) A-I      intronic chr15:90986000(+) A-I      intronic chr15:90986129(+) A-I      intronic chr15:90986153(+) A-I      intronic chr15:90986154(+) A-I      intronic chr15:90986186(+) A-I      intronic chr15:90986308(+) A-I      intronic chr15:90987086(+) A-I      intronic chr15:90987125(+) A-I      intronic chr15:91000728(+) A-I      intronic chr15:90987136(+) A-I      intronic chr15:90987138(+) A-I      intronic chr15:90987216(+) A-I      intronic chr15:90987540(+) A-I      intronic chr15:90987593(+) A-I      intronic chr15:90987750(+) A-I      intronic chr15:90988128(+) A-I      intronic chr15:90988257(+) A-I      intronic chr15:90988260(+) A-I      intronic chr15:90988293(+) A-I      intronic chr15:90988311(+) A-I      intronic chr15:91023458(+) A-I      intronic chr15:91018934(+) A-I      intronic chr15:91018917(+) A-I      intronic chr15:91018897(+) A-I      intronic chr15:91018894(+) A-I      intronic chr15:91018856(+) A-I      intronic chr15:91018784(+) A-I      intronic chr15:91018705(+) A-I      intronic chr15:90938759(+) A-I      intronic chr15:90941233(+) A-I      intronic chr15:90942222(+) A-I      intronic chr15:90947031(+) A-I      intronic chr15:90959860(+) A-I      intronic chr15:90966650(+) A-I      intronic chr15:90968292(+) A-I      intronic chr15:90968303(+) A-I      intronic chr15:90968361(+) A-I      intronic chr15:90968365(+) A-I      intronic chr15:91000000(+) A-I      intronic chr15:91000684(+) A-I      intronic chr15:91000707(+) A-I      intronic chr15:91018646(+) A-I      intronic chr15:91018122(+) A-I      intronic chr15:91015371(+) A-I      intronic chr15:91014825(+) A-I      intronic chr15:91014788(+) A-I      intronic chr15:91014751(+) A-I      intronic chr15:91012004(+) A-I      intronic chr15:91011996(+) A-I      intronic chr15:91011969(+) A-I      intronic chr15:91011952(+) A-I      intronic chr15:91011867(+) A-I      intronic chr15:91011789(+) A-I      intronic chr15:91011472(+) A-I      intronic chr15:91010173(+) A-I      intronic chr15:91010159(+) A-I      intronic chr15:91010146(+) A-I      intronic chr15:91010077(+) A-I      intronic chr15:91010069(+) A-I      intronic chr15:91005325(+) A-I      intronic chr15:91005188(+) A-I      intronic chr15:91005143(+) A-I      intronic chr15:91004952(+) A-I      intronic chr15:91004928(+) A-I      intronic chr15:90978476(+) A-I      intronic chr15:90987736(+) A-I      intronic chr15:90964290(+) A-I      intronic chr15:91032549(+) A-I      intronic chr15:91011829(+) A-I      intronic chr15:91019261(+) A-I      intronic chr15:90986415(+) A-I      intronic chr15:90980904(+) A-I      intronic chr15:91034248(+) A-I      intronic chr15:91011978(+) A-I      intronic chr15:90946410(+) A-I      intronic chr15:90946423(+) A-I      intronic chr15:90980928(+) A-I      intronic chr15:91011801(+) A-I      intronic chr15:91012050(+) A-I      intronic chr15:91011320(+) A-I      intronic chr15:91005263(+) A-I      intronic chr15:90946319(+) A-I      intronic chr15:91011892(+) A-I      intronic chr15:91015401(+) A-I      intronic chr15:91018727(+) A-I      intronic chr15:91022849(+) A-I      intronic chr15:91008773(+) A-I      intronic chr15:91011428(+) A-I      intronic chr15:91018167(+) A-I      intronic chr15:90934282(+) A-I      intronic chr15:91018787(+) A-I      intronic chr15:90987135(+) A-I      intronic chr15:91011559(+) A-I      intronic chr15:90988178(+) A-I      intronic chr15:90986300(+) A-I      intronic chr15:90987751(+) A-I      intronic chr15:91011405(+) A-I      intronic chr15:91011331(+) A-I      intronic chr15:90942300(+) A-I      intronic chr15:91021288(+) A-I      intronic chr15:90986218(+) A-I      intronic chr15:90946254(+) A-I      intronic chr15:91011477(+) A-I      intronic chr15:90986215(+) A-I      intronic chr15:90971802(+) A-I      intronic chr15:90978544(+) A-I      intronic chr15:91005116(+) A-I      intronic chr15:90978547(+) A-I      intronic chr15:90987081(+) A-I      intronic chr15:91018547(+) A-I      intronic chr15:91005003(+) A-I      intronic chr15:90963979(+) A-I      intronic chr15:90966536(+) A-I      intronic chr15:91018483(+) A-I      intronic chr15:90986330(+) A-I      intronic chr15:91015448(+) A-I      intronic chr15:91018111(+) A-I      intronic chr15:91018160(+) A-I      intronic chr15:90946247(+) A-I      intronic chr15:91011972(+) A-I      intronic chr15:91011506(+) A-I      intronic chr15:90980871(+) A-I      intronic chr15:91011866(+) A-I      intronic chr15:91035602(+) A-I      intronic chr15:90932799(+) A-I      intronic chr15:91011916(+) A-I      intronic chr15:90980972(+) A-I      intronic chr15:91000874(+) A-I      intronic chr15:91011401(+) A-I      intronic chr15:90978587(+) A-I      intronic chr15:90968346(+) A-I      intronic chr15:91015404(+) A-I      intronic chr15:91012051(+) A-I      intronic chr15:90933131(+) A-I      intronic chr15:90966592(+) A-I      intronic chr15:91031359(+) A-I      intronic chr15:90987615(+) A-I      intronic chr15:90932671(+) A-I      intronic chr15:90989143(+) A-I      intronic chr15:91018645(+) A-I      intronic chr15:90971583(+) A-I      intronic chr15:90942327(+) A-I      intronic chr15:91018725(+) A-I      intronic chr15:90987647(+) A-I      intronic chr15:91034225(+) A-I      intronic chr15:90934210(+) A-I      intronic chr15:90933175(+) A-I      intronic chr15:90933192(+) A-I      intronic chr15:91018612(+) A-I      intronic chr15:91000035(+) A-I      intronic chr15:91018796(+) A-I      intronic chr15:90942099(+) A-I      intronic chr15:91018878(+) A-I      intronic chr15:90974350(+) A-I      intronic chr15:90933102(+) A-I      intronic chr15:91004979(+) A-I      intronic chr15:91015432(+) A-I      intronic chr15:90987725(+) A-I      intronic chr15:90972012(+) A-I      intronic chr15:90968380(+) A-I      intronic chr15:91018728(+) A-I      intronic chr15:91018935(+) A-I      intronic chr15:90933132(+) A-I      intronic chr15:90988204(+) A-I      intronic chr15:91023379(+) A-I      intronic chr15:91018838(+) A-I      intronic chr15:90934286(+) A-I      intronic chr15:90970419(+) A-I      intronic chr15:90933039(+) A-I      intronic chr15:90971398(+) A-I      intronic chr15:91014809(+) A-I      intronic chr15:90971761(+) A-I      intronic chr15:91018864(+) A-I      intronic chr15:91004980(+) A-I      intronic chr15:91005110(+) A-I      intronic chr15:90946324(+) A-I      intronic chr15:91014783(+) A-I      intronic chr15:91011374(+) A-I      intronic chr15:90933005(+) A-I      intronic chr15:91000763(+) A-I      intronic chr15:90966061(+) A-I      intronic chr15:91018116(+) A-I      intronic chr15:90970383(+) A-I      intronic chr15:90971352(+) A-I      intronic chr15:91019191(+) A-I      intronic chr15:90964946(+) A-I      intronic chr15:90934411(+) A-I      intronic chr15:90964184(+) A-I      intronic chr15:90986083(+) A-I      intronic chr15:91011380(+) A-I      intronic chr15:91011464(+) A-I      intronic chr15:90932798(+) A-I      intronic chr15:91029861(+) A-I      intronic chr15:90938617(+) A-I      intronic chr15:91011519(+) A-I      intronic chr15:90981032(+) A-I      intronic chr15:91000792(+) A-I      intronic chr15:91004047(+) A-I      intronic chr15:91011799(+) A-I      intronic chr15:90946387(+) A-I      intronic chr15:91000752(+) A-I      intronic chr15:91011808(+) A-I      intronic chr15:91018906(+) A-I      intronic chr15:91005168(+) A-I      intronic chr15:91005279(+) A-I      intronic chr15:90936179(+) A-I      intronic chr15:91032526(+) A-I      intronic chr15:91011887(+) A-I      intronic chr15:90964614(+) A-I      intronic chr15:90942135(+) A-I      intronic chr15:90946366(+) A-I      intronic chr15:91012005(+) A-I      intronic chr15:91000936(+) A-I      intronic chr15:90970694(+) A-I      intronic chr15:90932753(+) A-I      intronic chr15:90942979(+) A-I      intronic chr15:91031216(+) A-I      intronic chr15:90987034(+) A-I      intronic chr15:90984140(+) A-I      intronic chr15:91011386(+) A-I      intronic chr15:91019254(+) A-I      intronic chr15:90981033(+) A-I      intronic chr15:90971362(+) A-I      intronic chr15:91018851(+) A-I      intronic chr15:90980956(+) A-I      intronic chr15:91031322(+) A-I      intronic chr15:91000788(+) A-I      intronic chr15:90986320(+) A-I      intronic chr15:91011471(+) A-I      intronic chr15:91018312(+) A-I      intronic chr15:91018865(+) A-I      intronic chr15:91018643(+) A-I      intronic chr15:90936142(+) A-I      intronic chr15:90934217(+) A-I      intronic chr15:91018769(+) A-I      intronic chr15:90989144(+) A-I      intronic chr15:90934385(+) A-I      intronic chr15:90933031(+) A-I      intronic chr15:91031267(+) A-I      intronic chr15:91018574(+) A-I      intronic chr15:91018168(+) A-I      intronic chr15:91022863(+) A-I      intronic chr15:90946288(+) A-I      intronic chr15:90980870(+) A-I      intronic chr15:90968567(+) A-I      intronic chr15:90985568(+) A-I      intronic chr15:91034228(+) A-I      intronic chr15:90965076(+) A-I      intronic chr15:90987614(+) A-I      intronic chr15:90966591(+) A-I      intronic chr15:90942118(+) A-I      intronic chr15:90987217(+) A-I      intronic chr15:90987105(+) A-I      intronic chr15:90964941(+) A-I      intronic chr15:90942117(+) A-I      intronic chr15:90970401(+) A-I      intronic chr15:91018145(+) A-I      intronic chr15:91008799(+) A-I      intronic chr15:91018544(+) A-I      intronic chr15:90966645(+) A-I      intronic chr15:90946983(+) A-I      intronic chr15:90986981(+) A-I      intronic chr15:90971940(+) A-I      intronic chr15:90932826(+) A-I      intronic chr15:91022701(+) A-I      intronic chr15:90936180(+) A-I      intronic chr15:91032425(+) A-I      intronic chr15:91018181(+) A-I      intronic chr15:91018797(+) A-I      intronic chr15:90933042(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	IQGAP1	chr15:91015371(+) A-I intron -    21960545 chr15:91000603(+) T-C intron -    22484847 chr15:90933039(+) A-G intron -    22484847 chr15:90933175(+) A-G intron -    22484847 chr15:90988178(+) A-G intron -    22484847 chr15:90988204(+) A-G intron -    22484847 chr15:91011916(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	IQGAP1	chr15:90931474-90931475(+) m6A 5'UTR       25456834//24981863 chr15:90931556-90931557(+) m6A 5'UTR       24981863//22575960 chr15:90934024-90934025(+) m6A CDS//intron       24981863//22575960 chr15:90934095-90934096(+) m1A CDS//intron       26863196 chr15:90934145-90934146(+) m6A 3'UTR//intron       24981863 chr15:90934454-90934455(+) m6A 3'UTR//intron       - chr15:90969386-90969387(+) m6A 5'UTR//CDS//exon//intron       - chr15:90969425-90969426(+) m6A 5'UTR//CDS//exon//intron       - chr15:90991952-90991953(+) m6A CDS//intron       24981863 chr15:90991964-90991965(+) m6A CDS//intron       24981863 chr15:90992799-90992800(+) m6A CDS//intron       24981863 chr15:90992848-90992849(+) m6A CDS//intron       24981863 chr15:90996514-90996515(+) m6A CDS//intron       22575960 chr15:90997680-90997681(+) m6A CDS//intron       22575960 chr15:90999471-90999472(+) m6A CDS//intron       26404942//22575960 chr15:90999512-90999513(+) m6A CDS//intron       27773535//22575960 chr15:91009302-91009303(+) m6A CDS       22575960 chr15:91009556-91009557(+) m6A CDS       22575960 chr15:91009619-91009620(+) m6A CDS       27773535 chr15:91009657-91009658(+) m6A CDS       26404942//27773535 chr15:91016109-91016110(+) m6A CDS       22575960 chr15:91020344-91020345(+) m6A CDS       26404942 chr15:91020365-91020366(+) m6A CDS       26404942 chr15:91020439-91020440(+) m6A CDS       26404942 chr15:91021107-91021108(+) m6A CDS       24981863 chr15:91025194-91025195(+) m6A CDS       24981863 chr15:91025246-91025247(+) m6A CDS       24981863 chr15:91025256-91025257(+) m6A CDS       24981863 chr15:91025271-91025272(+) m6A CDS       24981863 chr15:91030178-91030179(+) m6A exon//intron       - chr15:91030772-91030773(+) m6A 3'UTR//CDS//exon       24981863 chr15:91030793-91030794(+) m6A 3'UTR//CDS//exon       24981863 chr15:91030810-91030811(+) m6A 3'UTR//CDS//exon       24981863 chr15:91034572-91034573(+) m6A 3'UTR//CDS//exon       24981863//27773535 chr15:91034615-91034616(+) m6A 3'UTR//CDS//exon       24981863//27773535 chr15:91034655-91034656(+) m6A 3'UTR//CDS//exon       24981863//27773535 chr15:91034696-91034697(+) m6A 3'UTR//CDS//exon       24981863//27773535 chr15:91034726-91034727(+) m6A 3'UTR//CDS//exon       24981863//27773535 chr15:91034733-91034734(+) m6A 3'UTR//CDS//exon       24981863//27773535 chr15:91034742-91034743(+) m6A 3'UTR//CDS//exon       24981863//27773535 chr15:91034755-91034756(+) m6A 3'UTR//CDS//exon       24981863//27773535 chr15:91034793-91034794(+) m6A exon//intron       24981863//27773535 chr15:91034802-91034803(+) m6A exon//intron       24981863//27773535 chr15:91034836-91034837(+) m6A exon//intron       24981863//27773535 chr15:91035820-91035821(+) m6A 3'UTR//CDS//exon       24981863 chr15:91035829-91035830(+) m6A 3'UTR//CDS//exon       24981863//26404942 chr15:91035839-91035840(+) m6A 3'UTR//CDS//exon       24981863//26404942 chr15:91035855-91035856(+) m6A 3'UTR//CDS//exon       24981863//26404942 chr15:91035911-91035912(+) m6A 3'UTR//CDS//exon       24981863//26404942 chr15:91038016-91038017(+) m6A 3'UTR//CDS//exon       24981863 chr15:91038051-91038052(+) m6A 3'UTR//CDS//exon       24981863 chr15:91040432-91040433(+) m6A exon//intron       24981863 chr15:91043429-91043430(+) m6A 3'UTR//exon       26404942 chr15:91043502-91043503(+) m6A 3'UTR//exon       26404942 chr15:91044842-91044843(+) Y 3'UTR//exon       25219674 chr15:91045270-91045271(+) m6A 3'UTR//exon       27773535 chr15:91045400-91045401(+) m6A 3'UTR//exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	IQGAP1	Chromatin K562 cells     - Cytosol HeLa-S3 cells|K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Insoluble cytoplasm K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H3-3p
Interactor2: IQGAP1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg