Basic Information:

  VIRBase ID:  

VHID00083823

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H3-3p:  MIMAT0008400          MLX:  NM_198204     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H3-3p	MLX
miRBase Accession/Entrez ID	MIMAT0008400	6945
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	bHLHd13//MAD7//MXD7//TCFL4//TF4

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MLX	chr17:40720234(+) A-I      intronic chr17:40720226(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MLX	chr17:40719320-40719321(+) m6A CDS//exon//intron       - chr17:40720803-40720804(+) m6A exon//intron       - chr17:40720863-40720864(+) m6A CDS//exon       24981863 chr17:40720905-40720906(+) m6A CDS//exon       24981863 chr17:40721242-40721243(+) m6A CDS//exon//intron       24981863 chr17:40721270-40721271(+) m6A CDS//exon//intron       24981863 chr17:40721649-40721650(+) m6A exon//intron       - chr17:40721655-40721656(+) m6A exon//intron       - chr17:40723607-40723608(+) m6A CDS//exon       24284625//24981863 chr17:40723634-40723635(+) m6A 3'UTR//exon       24284625//25456834//24981863//26404942 chr17:40723643-40723644(+) m6A 3'UTR//exon       24284625//25456834//24981863//26404942//22608085 chr17:40723684-40723685(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22608085 chr17:40723701-40723702(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr17:40723706-40723707(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr17:40723838-40723839(+) m6A 3'UTR//exon       24284625//24209618//24981863//22608085 chr17:40723844-40723845(+) m6A 3'UTR//exon       24284625//24209618//24981863//22608085 chr17:40723901-40723902(+) m6A 3'UTR//exon       24284625//24209618//24981863//22608085 chr17:40723979-40723980(+) m6A 3'UTR//exon       24981863 chr17:40724478-40724479(+) m6A 3'UTR//exon       24981863//27773535 chr17:40724889-40724890(+) m6A 3'UTR//exon       27773535 chr17:40724912-40724913(+) m6A 3'UTR//exon       24209618//27773535 chr17:40724931-40724932(+) m6A 3'UTR//exon       24209618//27773535 chr17:40725049-40725050(+) m6A 3'UTR//exon       24209618//27773535//22608085 chr17:40725057-40725058(+) m6A 3'UTR//exon       24209618//27773535//22608085 chr17:40725086-40725087(+) m6A 3'UTR//exon       24209618//27773535//22608085 chr17:40725129-40725130(+) m6A 3'UTR//exon       24209618//24981863//27773535//22608085 chr17:40725171-40725172(+) m6A 3'UTR//exon       24209618//24981863//27773535 chr17:40725199-40725200(+) m6A 3'UTR//exon       24209618//24981863//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MLX	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Membrane K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H3-3p
Interactor2: MLX

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg