Basic Information:

  VIRBase ID:  

VHID00082467

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H2-3p:  MIMAT0008399          RCOR2:  NM_173587     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H2-3p	RCOR2
miRBase Accession/Entrez ID	MIMAT0008399	283248
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RCOR2	chr11:63680880(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RCOR2	chr11:63678785-63678786(-) m6A 3'UTR       24284625 chr11:63679207-63679208(-) m6A 3'UTR       24284625//25456834//27371828 chr11:63679220-63679221(-) m6A 3'UTR       24284625//25456834//27371828 chr11:63679248-63679249(-) m6A 3'UTR       25456834//27371828 chr11:63679257-63679258(-) m6A 3'UTR       25456834//27371828 chr11:63679301-63679302(-) m6A 3'UTR       25456834//24981863//27371828 chr11:63679368-63679369(-) m6A CDS//exon       25456834//27371828 chr11:63681553-63681554(-) m6A CDS       27371828 chr11:63681891-63681892(-) m6A CDS       24981863//27371828 chr11:63681900-63681901(-) m6A CDS       24981863//27371828 chr11:63681933-63681934(-) m6A CDS       24981863//27371828 chr11:63681946-63681947(-) m6A CDS       24981863//27371828 chr11:63681958-63681959(-) m6A CDS       - chr11:63683062-63683063(-) m6A CDS       24284625 chr11:63683847-63683848(-) m6A CDS       24284625 chr11:63684071-63684072(-) m6A 5'UTR       25456834//27371828 chr11:63684144-63684145(-) m6A 5'UTR       24284625//25456834//24981863//27371828 chr11:63684183-63684184(-) m6A 5'UTR       24284625//25456834//24981863//27371828 chr11:63684232-63684233(-) m6A 5'UTR       25456834//24981863//27371828 chr11:63684256-63684257(-) m6A 5'UTR       25456834//24981863//27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RCOR2	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H2-3p
Interactor2: RCOR2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg