Basic Information:

  VIRBase ID:  

VHID00082287

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H2-3p:  MIMAT0008399          FUT11:  NM_001284194     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H2-3p	FUT11
miRBase Accession/Entrez ID	MIMAT0008399	170384
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FUCTXI

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FUT11	chr10:75532089-75532090(+) m6A 5'UTR       24981863//27773536//22608085 chr10:75532210-75532211(+) m6A CDS       24209618//25456834//24981863//27773536//22608085 chr10:75532311-75532312(+) m6A CDS       24209618//25456834//24981863//27773536//22608085 chr10:75532365-75532366(+) m6A CDS//exon       24209618//25456834//24981863//22575960//22608085 chr10:75532413-75532414(+) m6A CDS//exon       24209618//24981863//22575960//22608085 chr10:75532431-75532432(+) m6A CDS//exon       24209618//24981863//22575960//22608085 chr10:75532467-75532468(+) m6A CDS//exon       24209618//24981863 chr10:75532649-75532650(+) m6A CDS//exon       22575960 chr10:75532758-75532759(+) m6A CDS//exon       22575960 chr10:75532764-75532765(+) m6A CDS//exon       22575960 chr10:75532951-75532952(+) m6A CDS//exon       22575960 chr10:75533005-75533006(+) m6A CDS//exon       24209618//22575960 chr10:75533114-75533115(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085 chr10:75533176-75533177(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:75533188-75533189(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:75533260-75533261(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr10:75533423-75533424(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr10:75533470-75533471(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr10:75533515-75533516(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22608085 chr10:75534378-75534379(+) m6A exon//intron       - chr10:75534445-75534446(+) m6A exon//intron       - chr10:75534474-75534475(+) m6A exon//intron       - chr10:75534840-75534841(+) m6A exon//intron       - chr10:75535196-75535197(+) m6A CDS//intron       24209618//25456834//24981863//22608085 chr10:75535246-75535247(+) m6A CDS//intron       24209618//25456834//24981863//22608085 chr10:75535339-75535340(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr10:75535380-75535381(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr10:75535501-75535502(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:75535525-75535526(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:75535536-75535537(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr10:75535672-75535673(+) m6A 3'UTR//intron       24284625//24209618//24981863//22608085 chr10:75535677-75535678(+) m6A 3'UTR//intron       24284625//24209618//24981863//22608085 chr10:75535685-75535686(+) m6A 3'UTR//intron       24284625//24209618//24981863//22608085 chr10:75535727-75535728(+) m6A 3'UTR//intron       24209618//24981863//22608085 chr10:75535825-75535826(+) m6A 3'UTR//intron       22608085 chr10:75538697-75538698(+) m6A exon       24981863 chr10:75538720-75538721(+) m6A exon       24981863 chr10:75538738-75538739(+) m6A exon       24981863//22608085 chr10:75538829-75538830(+) m6A exon       24284625//24981863//22608085 chr10:75538851-75538852(+) m6A exon       24284625//24981863//22608085 chr10:75539006-75539007(+) m6A exon       24284625//24981863//22608085 chr10:75539098-75539099(+) m6A exon       24209618//22608085 chr10:75539122-75539123(+) m6A exon       24209618//24981863//22608085 chr10:75539145-75539146(+) m6A exon       24209618//24981863//22608085 chr10:75539241-75539242(+) m6A exon       24209618//25456834//24981863//22608085 chr10:75539266-75539267(+) m6A exon       24209618//25456834//24981863//22608085 chr10:75539297-75539298(+) m6A exon       24284625//24209618//25456834//24981863//22608085 chr10:75539311-75539312(+) m6A exon       24284625//24209618//25456834//24981863//22608085 chr10:75539387-75539388(+) m6A exon       24284625//24209618//24981863//22608085 chr10:75539460-75539461(+) m6A exon       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FUT11	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H2-3p
Interactor2: FUT11

Evidence Support:

Prediction-Evidence	cRep//miRanda
Support Database	RepTar//VmiReg