Basic Information:

  VIRBase ID:  

VHID00082082

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H2-3p:  MIMAT0008399          CLDN23:  NM_194284     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H2-3p	CLDN23
miRBase Accession/Entrez ID	MIMAT0008399	137075
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CLDNL//hCG1646163

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CLDN23	chr8:8559698-8559699(+) m6A 5'UTR       25456834 chr8:8559732-8559733(+) m6A 5'UTR       25456834 chr8:8560020-8560021(+) m6A CDS       25456834//24981863 chr8:8560059-8560060(+) m6A CDS       25456834//24981863 chr8:8560107-8560108(+) m6A CDS       25456834//24981863 chr8:8560492-8560493(+) m6A CDS       24981863 chr8:8560824-8560825(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr8:8560862-8560863(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr8:8560868-8560869(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr8:8560913-8560914(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr8:8560918-8560919(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr8:8560923-8560924(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr8:8561078-8561079(+) m6A 3'UTR       24284625//25456834//24981863 chr8:8561085-8561086(+) m6A 3'UTR       24284625//25456834//24981863 chr8:8561113-8561114(+) m6A 3'UTR       24284625//25456834//24981863 chr8:8561223-8561224(+) m6A 3'UTR       24284625//24981863 chr8:8561278-8561279(+) m6A 3'UTR       24284625//24981863 chr8:8561449-8561450(+) m6A 3'UTR       24981863 chr8:8561508-8561509(+) m6A 3'UTR       24981863 chr8:8561539-8561540(+) m6A 3'UTR       24981863 chr8:8561600-8561601(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CLDN23	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H2-3p
Interactor2: CLDN23

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg