Detail Information

Basic Information:


  VIRBase ID:  

VHID00082015

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H2-3p:           ZNF648:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H2-3p ZNF648
miRBase
Accession/Entrez ID
MIMAT0008399 127665
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ZNF648
chr1:182028843(-) A-I      intronic
chr1:182028812(-) A-I      intronic
chr1:182028834(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ZNF648
chr1:182026808-182026809(-) m6A CDS       25456834
chr1:182026866-182026867(-) m6A CDS       25456834

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ZNF648
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H2-3p
Interactor2: ZNF648

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid
Support Database VmiReg

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