Detail Information

Basic Information:


  VIRBase ID:  

VHID00081969

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H2-3p:           HSF5:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H2-3p HSF5
miRBase
Accession/Entrez ID		 MIMAT0008399 124535
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - HSF 5//HSTF 5

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR HSF5
chr17:56510653(-) A-I      intronic
chr17:56510523(-) A-I      intronic
chr17:56513200(-) A-I      intronic
chr17:56506808(-) A-I      intronic
chr17:56516257(-) A-I      intronic
chr17:56516312(-) A-I      intronic
chr17:56516314(-) A-I      intronic
chr17:56516340(-) A-I      intronic
chr17:56524423(-) A-I      intronic
chr17:56538003(-) A-I      intronic
chr17:56538009(-) A-I      intronic
chr17:56538048(-) A-I      intronic
chr17:56538050(-) A-I      intronic
chr17:56506812(-) A-I      intronic
chr17:56516260(-) A-I      intronic
chr17:56506901(-) A-I      intronic
chr17:56538534(-) A-I      intronic
chr17:56555573(-) A-I      intronic
chr17:56555565(-) A-I      intronic
chr17:56506813(-) A-I      intronic
chr17:56555729(-) A-I      intronic
chr17:56516256(-) A-I      intronic
chr17:56555726(-) A-I      intronic
chr17:56556840(-) A-I      intronic
chr17:56538143(-) A-I      intronic
chr17:56559414(-) A-I      intronic
chr17:56513213(-) A-I      intronic
chr17:56500232(-) A-I      intronic
chr17:56501851(-) A-I      intronic
chr17:56558341(-) A-I      intronic
chr17:56556737(-) A-I      intronic
chr17:56500261(-) A-I      intronic
chr17:56513234(-) A-I      intronic
chr17:56564476(-) A-I      intronic
chr17:56558216(-) A-I      intronic
chr17:56537666(-) A-I      intronic
chr17:56554097(-) A-I      intronic
chr17:56500250(-) A-I      intronic
chr17:56502659(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED HSF5
chr17:56554097(-) A-I intron -    21960545

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate HSF5
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H2-3p
Interactor2: HSF5

Evidence Support:


Prediction-Evidence cRep//miRanda
Support Database RepTar//VmiReg

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