Basic Information:

  VIRBase ID:  

VHID00080987

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H2-3p:  MIMAT0008399          ANKS1B:  NM_001204070     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H2-3p	ANKS1B
miRBase Accession/Entrez ID	MIMAT0008399	56899
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AIDA//AIDA-1//ANKS2//cajalin-2//EB-1//EB1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ANKS1B	chr12:99308171(-) A-I      intronic chr12:99308163(-) A-I      intronic chr12:99308167(-) A-I      intronic chr12:99128859(-) A-I      3'UTR chr12:99128769(-) A-I      3'UTR chr12:99128782(-) A-I      3'UTR chr12:99128858(-) A-I      3'UTR chr12:99308168(-) A-I      intronic chr12:99128854(-) A-I      3'UTR chr12:99128843(-) A-I      3'UTR chr12:99128834(-) A-I      3'UTR chr12:99346969(-) A-I      intronic chr12:99128783(-) A-I      3'UTR chr12:99346923(-) A-I      intronic chr12:99128791(-) A-I      3'UTR chr12:99128804(-) A-I      3'UTR chr12:99128805(-) A-I      3'UTR chr12:99128823(-) A-I      3'UTR chr12:99307872(-) A-I      intronic chr12:99307882(-) A-I      intronic chr12:99307885(-) A-I      intronic chr12:99128808(-) A-I      3'UTR chr12:99128809(-) A-I      3'UTR chr12:99128816(-) A-I      3'UTR chr12:99307930(-) A-I      intronic chr12:99308134(-) A-I      intronic chr12:99308139(-) A-I      intronic chr12:99128822(-) A-I      3'UTR chr12:99346947(-) A-I      intronic chr12:99346943(-) A-I      intronic chr12:99128838(-) A-I      3'UTR chr12:99346937(-) A-I      intronic chr12:99346936(-) A-I      intronic chr12:99346910(-) A-I      intronic chr12:99387135(-) A-I      intronic chr12:99380634(-) A-I      intronic chr12:99380616(-) A-I      intronic chr12:99379090(-) A-I      intronic chr12:99378553(-) A-I      intronic chr12:99923259(-) A-I      intronic chr12:99375317(-) A-I      intronic chr12:99375274(-) A-I      intronic chr12:99374912(-) A-I      intronic chr12:99347187(-) A-I      intronic chr12:99344636(-) A-I      intronic chr12:99340635(-) A-I      intronic chr12:99340497(-) A-I      intronic chr12:99339178(-) A-I      intronic chr12:99244526(-) A-I      intronic chr12:99244338(-) A-I      intronic chr12:99244331(-) A-I      intronic chr12:99244308(-) A-I      intronic chr12:99244249(-) A-I      intronic chr12:99241556(-) A-I      intronic chr12:99241553(-) A-I      intronic chr12:99241534(-) A-I      intronic chr12:99169509(-) A-I      intronic chr12:99167293(-) A-I      intronic chr12:99167274(-) A-I      intronic chr12:99167268(-) A-I      intronic chr12:99154226(-) A-I      intronic chr12:99153595(-) A-I      intronic chr12:99153586(-) A-I      intronic chr12:99152772(-) A-I      intronic chr12:99152758(-) A-I      intronic chr12:99150299(-) A-I      intronic chr12:99150256(-) A-I      intronic chr12:99149863(-) A-I      intronic chr12:99923256(-) A-I      intronic chr12:99616135(-) A-I      intronic chr12:99444527(-) A-I      intronic chr12:99394110(-) A-I      intronic chr12:99998554(-) A-I      intronic chr12:99388278(-) A-I      intronic chr12:99998541(-) A-I      intronic chr12:100178121(-) A-I      intronic chr12:99344609(-) A-I      intronic chr12:100371199(-) A-I      intronic chr12:99404737(-) A-I      intronic chr12:99380455(-) A-I      intronic chr12:99389103(-) A-I      intronic chr12:100371206(-) A-I      intronic chr12:99372756(-) A-I      intronic chr12:100178145(-) A-I      intronic chr12:99347147(-) A-I      intronic chr12:100178082(-) A-I      intronic chr12:99357082(-) A-I      intronic chr12:99404602(-) A-I      intronic chr12:99404794(-) A-I      intronic chr12:100178127(-) A-I      intronic chr12:99339221(-) A-I      intronic chr12:100345633(-) A-I      intronic chr12:99150392(-) A-I      intronic chr12:99357116(-) A-I      intronic chr12:100108860(-) A-I      intronic chr12:99378737(-) A-I      intronic chr12:99388273(-) A-I      intronic chr12:99373338(-) A-I      intronic chr12:100304050(-) A-I      intronic chr12:99170784(-) A-I      intronic chr12:99337912(-) A-I      intronic chr12:99444608(-) A-I      intronic chr12:99770979(-) A-I      intronic chr12:100363235(-) A-I      intronic chr12:99428202(-) A-I      intronic chr12:99188048(-) A-I      intronic chr12:99146152(-) A-I      intronic chr12:99372753(-) A-I      intronic chr12:99914696(-) A-I      intronic chr12:99404614(-) A-I      intronic chr12:99387146(-) A-I      intronic chr12:99340602(-) A-I      intronic chr12:99179085(-) A-I      intronic chr12:99378657(-) A-I      intronic chr12:99374117(-) A-I      intronic chr12:100345408(-) A-I      intronic chr12:99153724(-) A-I      intronic chr12:99182999(-) A-I      intronic chr12:99387008(-) A-I      intronic chr12:99241542(-) A-I      intronic chr12:99374881(-) A-I      intronic chr12:99387042(-) A-I      intronic chr12:99395089(-) A-I      intronic chr12:100108795(-) A-I      intronic chr12:99383488(-) A-I      intronic chr12:99340503(-) A-I      intronic chr12:99242614(-) A-I      intronic chr12:100178130(-) A-I      intronic chr12:100178223(-) A-I      intronic chr12:100178095(-) A-I      intronic chr12:100178150(-) A-I      intronic chr12:100178125(-) A-I      intronic chr12:100178222(-) A-I      intronic chr12:99404739(-) A-I      intronic chr12:100178088(-) A-I      intronic chr12:99776255(-) A-I      intronic chr12:99770950(-) A-I      intronic chr12:100178131(-) A-I      intronic chr12:100178155(-) A-I      intronic chr12:100178120(-) A-I      intronic chr12:99252272(-) A-I      intronic chr12:99347078(-) A-I      intronic chr12:99781370(-) A-I      intronic chr12:100124777(-) A-I      intronic chr12:99150457(-) A-I      intronic chr12:99386978(-) A-I      intronic chr12:100293859(-) A-I      intronic chr12:100293865(-) A-I      intronic chr12:100354789(-) A-I      intronic chr12:100354826(-) A-I      intronic chr12:99184360(-) A-I      intronic chr12:99781368(-) A-I      intronic chr12:99357120(-) A-I      intronic chr12:99375040(-) A-I      intronic chr12:99210211(-) A-I      intronic chr12:99185438(-) A-I      intronic chr12:99431050(-) A-I      intronic chr12:99357755(-) A-I      intronic chr12:99390443(-) A-I      intronic chr12:99378640(-) A-I      intronic chr12:99388283(-) A-I      intronic chr12:100352383(-) A-I      intronic chr12:99387236(-) A-I      intronic chr12:99428234(-) A-I      intronic chr12:99153646(-) A-I      intronic chr12:99357633(-) A-I      intronic chr12:99428297(-) A-I      intronic chr12:99340496(-) A-I      intronic chr12:99379089(-) A-I      intronic chr12:99184382(-) A-I      intronic chr12:99183058(-) A-I      intronic chr12:99494445(-) A-I      intronic chr12:99374257(-) A-I      intronic chr12:99374827(-) A-I      intronic chr12:100345581(-) A-I      intronic chr12:99435657(-) A-I      intronic chr12:99428121(-) A-I      intronic chr12:99347162(-) A-I      intronic chr12:99182983(-) A-I      intronic chr12:99375287(-) A-I      intronic chr12:99375262(-) A-I      intronic chr12:99357050(-) A-I      intronic chr12:99482761(-) A-I      intronic chr12:99496304(-) A-I      intronic chr12:99149872(-) A-I      intronic chr12:99153592(-) A-I      intronic chr12:99170712(-) A-I      intronic chr12:99373322(-) A-I      intronic chr12:99153610(-) A-I      intronic chr12:99494511(-) A-I      intronic chr12:99395182(-) A-I      intronic chr12:99435748(-) A-I      intronic chr12:99191997(-) A-I      intronic chr12:100134005(-) A-I      intronic chr12:99185487(-) A-I      intronic chr12:100349808(-) A-I      intronic chr12:99373113(-) A-I      intronic chr12:100288004(-) A-I      intronic chr12:99150273(-) A-I      intronic chr12:99372677(-) A-I      intronic chr12:99394265(-) A-I      intronic chr12:99344582(-) A-I      intronic chr12:99153636(-) A-I      intronic chr12:99357800(-) A-I      intronic chr12:99170777(-) A-I      intronic chr12:99378988(-) A-I      intronic chr12:99344574(-) A-I      intronic chr12:99347099(-) A-I      intronic chr12:99346950(-) A-I      intronic chr12:100063108(-) A-I      intronic chr12:99446249(-) A-I      intronic chr12:99404740(-) A-I      intronic chr12:99428222(-) A-I      intronic chr12:100073224(-) A-I      intronic chr12:100134874(-) A-I      intronic chr12:99252281(-) A-I      intronic chr12:99281664(-) A-I      intronic chr12:99372676(-) A-I      intronic chr12:99374849(-) A-I      intronic chr12:100304025(-) A-I      intronic chr12:99150279(-) A-I      intronic chr12:99153614(-) A-I      intronic chr12:99383637(-) A-I      intronic chr12:99150598(-) A-I      intronic chr12:99375053(-) A-I      intronic chr12:99770963(-) A-I      intronic chr12:99281570(-) A-I      intronic chr12:100302140(-) A-I      intronic chr12:99344253(-) A-I      intronic chr12:99281663(-) A-I      intronic chr12:99390403(-) A-I      intronic chr12:99252373(-) A-I      intronic chr12:99388334(-) A-I      intronic chr12:99184373(-) A-I      intronic chr12:99150458(-) A-I      intronic chr12:99245715(-) A-I      intronic chr12:99281610(-) A-I      intronic chr12:99330162(-) A-I      intronic chr12:99357242(-) A-I      intronic chr12:99379011(-) A-I      intronic chr12:99344669(-) A-I      intronic chr12:100343888(-) A-I      intronic chr12:99375070(-) A-I      intronic chr12:99404590(-) A-I      intronic chr12:99283607(-) A-I      intronic chr12:99380672(-) A-I      intronic chr12:99344273(-) A-I      intronic chr12:99170803(-) A-I      intronic chr12:99207431(-) A-I      intronic chr12:99184380(-) A-I      intronic chr12:99158265(-) A-I      intronic chr12:100345375(-) A-I      intronic chr12:99781372(-) A-I      intronic chr12:99495558(-) A-I      intronic chr12:99779084(-) A-I      intronic chr12:100124804(-) A-I      intronic chr12:99374180(-) A-I      intronic chr12:100069814(-) A-I      intronic chr12:100073276(-) A-I      intronic chr12:100361268(-) A-I      intronic chr12:100073287(-) A-I      intronic chr12:100345418(-) A-I      intronic chr12:99283551(-) A-I      intronic chr12:100108679(-) A-I      intronic chr12:99378567(-) A-I      intronic chr12:99375290(-) A-I      intronic chr12:99281517(-) A-I      intronic chr12:99388227(-) A-I      intronic chr12:99374963(-) A-I      intronic chr12:99494501(-) A-I      intronic chr12:99188004(-) A-I      intronic chr12:99374863(-) A-I      intronic chr12:99388159(-) A-I      intronic chr12:99281523(-) A-I      intronic chr12:100367153(-) A-I      intronic chr12:99383499(-) A-I      intronic chr12:99375293(-) A-I      intronic chr12:100262788(-) A-I      intronic chr12:99184374(-) A-I      intronic chr12:99244518(-) A-I      intronic chr12:99375054(-) A-I      intronic chr12:99576526(-) A-I      intronic chr12:99374263(-) A-I      intronic chr12:99316441(-) A-I      intronic chr12:99146230(-) A-I      intronic chr12:99495378(-) A-I      intronic chr12:99375252(-) A-I      intronic chr12:100134026(-) A-I      intronic chr12:99159502(-) A-I      intronic chr12:100362092(-) A-I      intronic chr12:100128100(-) A-I      intronic chr12:99170725(-) A-I      intronic chr12:99494567(-) A-I      intronic chr12:99323963(-) A-I      intronic chr12:99344030(-) A-I      intronic chr12:99374256(-) A-I      intronic chr12:100108785(-) A-I      intronic chr12:99496300(-) A-I      intronic chr12:100271754(-) A-I      intronic chr12:100073250(-) A-I      intronic chr12:99357164(-) A-I      intronic chr12:99494483(-) A-I      intronic chr12:100170525(-) A-I      intronic chr12:99380595(-) A-I      intronic chr12:99150306(-) A-I      intronic chr12:100343988(-) A-I      intronic chr12:99776399(-) A-I      intronic chr12:99154080(-) A-I      intronic chr12:99404587(-) A-I      intronic chr12:100302290(-) A-I      intronic chr12:100179429(-) A-I      intronic chr12:99150460(-) A-I      intronic chr12:99346765(-) A-I      intronic chr12:100073234(-) A-I      intronic chr12:99613916(-) A-I      intronic chr12:99192117(-) A-I      intronic chr12:100345455(-) A-I      intronic chr12:99372665(-) A-I      intronic chr12:99928759(-) A-I      intronic chr12:99374107(-) A-I      intronic chr12:99496439(-) A-I      intronic chr12:99390482(-) A-I      intronic chr12:100343862(-) A-I      intronic chr12:99404608(-) A-I      intronic chr12:99613906(-) A-I      intronic chr12:100302263(-) A-I      intronic chr12:99387018(-) A-I      intronic chr12:100124787(-) A-I      intronic chr12:99389112(-) A-I      intronic chr12:99410351(-) A-I      intronic chr12:99191911(-) A-I      intronic chr12:100363241(-) A-I      intronic chr12:99779195(-) A-I      intronic chr12:99370961(-) A-I      intronic chr12:99999296(-) A-I      intronic chr12:99357627(-) A-I      intronic chr12:99281594(-) A-I      intronic chr12:99404793(-) A-I      intronic chr12:99928760(-) A-I      intronic chr12:100362091(-) A-I      intronic chr12:99323181(-) A-I      intronic chr12:100286932(-) A-I      intronic chr12:99150286(-) A-I      intronic chr12:100362145(-) A-I      intronic chr12:99380701(-) A-I      intronic chr12:100354840(-) A-I      intronic chr12:99184960(-) A-I      intronic chr12:100128200(-) A-I      intronic chr12:99495577(-) A-I      intronic chr12:99170888(-) A-I      intronic chr12:99379015(-) A-I      intronic chr12:99346927(-) A-I      intronic chr12:100345540(-) A-I      intronic chr12:99347072(-) A-I      intronic chr12:99781360(-) A-I      intronic chr12:99388229(-) A-I      intronic chr12:99494440(-) A-I      intronic chr12:99152834(-) A-I      intronic chr12:99323948(-) A-I      intronic chr12:99378681(-) A-I      intronic chr12:99374973(-) A-I      intronic chr12:99951863(-) A-I      intronic chr12:99428192(-) A-I      intronic chr12:99164026(-) A-I      intronic chr12:99308133(-) A-I      intronic chr12:99328785(-) A-I      intronic chr12:100125002(-) A-I      intronic chr12:99388232(-) A-I      intronic chr12:100157749(-) A-I      intronic chr12:99346891(-) A-I      intronic chr12:99323933(-) A-I      intronic chr12:99316937(-) A-I      intronic chr12:99323065(-) A-I      intronic chr12:100354749(-) A-I      intronic chr12:99428215(-) A-I      intronic chr12:100073230(-) A-I      intronic chr12:99146236(-) A-I      intronic chr12:99576554(-) A-I      intronic chr12:99241606(-) A-I      intronic chr12:100124994(-) A-I      intronic chr12:99655462(-) A-I      intronic chr12:99274483(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ANKS1B	chr12:100178082(-) A-I intron -    22028664 chr12:100178088(-) A-I intron -    22028664 chr12:100178095(-) A-I intron -    22028664 chr12:100178120(-) A-I intron -    22028664 chr12:100178121(-) A-I intron -    22028664 chr12:100178125(-) A-I intron -    22028664 chr12:100178127(-) A-I intron -    22028664 chr12:100178130(-) A-I intron -    22028664 chr12:100178131(-) A-I intron -    22028664 chr12:100178145(-) A-I intron -    22028664 chr12:100178150(-) A-I intron -    22028664 chr12:100178155(-) A-I intron -    22028664 chr12:100178222(-) A-I intron -    22028664 chr12:100178223(-) A-I intron -    22028664 chr12:99340512(-) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ANKS1B	chr12:100166726-100166727(-) m6A CDS//exon//intron       27773535 chr12:100166766-100166767(-) m6A CDS//exon//intron       27773535 chr12:100166787-100166788(-) m6A CDS//exon//intron       27773535 chr12:100200353-100200354(-) m6A CDS//intron       27773535 chr12:100200363-100200364(-) m6A CDS//intron       27773535 chr12:100200433-100200434(-) m6A CDS//intron       27773535 chr12:100200462-100200463(-) m6A CDS//intron       27773535 chr12:100205935-100205936(-) m6A CDS//intron       27773535 chr12:100205959-100205960(-) m6A CDS//intron       27773535 chr12:100219091-100219092(-) m6A CDS//intron       27773535 chr12:100219134-100219135(-) m6A CDS//intron       27773535 chr12:100219143-100219144(-) m6A CDS//intron       27773535 chr12:100377907-100377908(-) m6A 5'UTR//CDS       27773535 chr12:100378004-100378005(-) m6A 5'UTR//CDS       24981863 chr12:100378224-100378225(-) m6A 5'UTR       27773536 chr12:100378409-100378410(-) m6A 5'UTR       24981863//27773536 chr12:99128725-99128726(-) m6A 3'UTR//intron       24981863 chr12:99139004-99139005(-) m6A 3'UTR//intron       27773535 chr12:99139010-99139011(-) m6A 3'UTR//intron       27773535 chr12:99139530-99139531(-) m6A 3'UTR//CDS//exon//intron       25456834 chr12:99139602-99139603(-) m6A 3'UTR//CDS//exon//intron       25456834 chr12:99145171-99145172(-) m6A 3'UTR//CDS       25456834 chr12:99145180-99145181(-) m6A 3'UTR//CDS       25456834 chr12:99145267-99145268(-) m6A 3'UTR//CDS       27773535 chr12:99640299-99640300(-) m6A CDS//exon       25456834//27773535 chr12:99640350-99640351(-) m6A CDS//exon       25456834//27773535 chr12:99640384-99640385(-) m6A CDS//exon       25456834//27773535 chr12:99640403-99640404(-) m6A CDS//exon       27773535 chr12:99793576-99793577(-) m6A CDS       27773535 chr12:99793583-99793584(-) m6A CDS       27773535 chr12:99837535-99837536(-) m6A CDS       27773535 chr12:99837551-99837552(-) m6A CDS       27773535 chr12:99898256-99898257(-) m6A CDS       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ANKS1B	Cytosol HCC cell line (HepG2)     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H2-3p
Interactor2: ANKS1B

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg