Basic Information:

  VIRBase ID:  

VHID00080677

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H2-3p:  MIMAT0008399          RIPK4:  NM_020639     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H2-3p	RIPK4
miRBase Accession/Entrez ID	MIMAT0008399	54101
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ANKK2//ANKRD3//CHANDS//DIK//NKRD3//PKK//PPS2//RIP4

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RIPK4	chr21:43160756-43160757(-) m6A 3'UTR       25456834 chr21:43160980-43160981(-) m6A 3'UTR       24284625//25456834//24981863//27371828//27773536//22608085 chr21:43161002-43161003(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22608085 chr21:43161095-43161096(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr21:43161244-43161245(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr21:43161252-43161253(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr21:43161309-43161310(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22608085 chr21:43161437-43161438(-) m6A CDS       24284625//24981863//27371828//27773536//22608085 chr21:43161751-43161752(-) m6A CDS       24284625//25456834//24981863//27371828//22608085 chr21:43161836-43161837(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22608085 chr21:43161844-43161845(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22608085 chr21:43162045-43162046(-) m6A CDS       24284625//25456834//27371828//27773536//22608085 chr21:43162057-43162058(-) m6A CDS       24284625//25456834//27371828//27773536//22608085 chr21:43162089-43162090(-) m6A CDS       24284625//25456834//27371828//27773536//22608085 chr21:43162099-43162100(-) m6A CDS       24284625//25456834//27773536//22608085 chr21:43166921-43166922(-) m6A CDS       24284625//27773536 chr21:43176715-43176716(-) m6A CDS       27773536 chr21:43176730-43176731(-) m6A CDS       27773536 chr21:43176769-43176770(-) m6A CDS       27773536 chr21:43186192-43186193(-) m6A intron       27371828 chr21:43187065-43187066(-) m6A CDS       24981863//27773536 chr21:43187182-43187183(-) m6A CDS       25456834//24981863//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RIPK4	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H2-3p
Interactor2: RIPK4

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg