Basic Information:

  VIRBase ID:  

VHID00080441

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H2-3p:  MIMAT0008399          HDHD5:  NM_033070     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H2-3p	HDHD5
miRBase Accession/Entrez ID	MIMAT0008399	27440
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CECR5

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	HDHD5	chr22:17637751(-) A-I      intronic chr22:17637726(-) A-I      intronic chr22:17637725(-) A-I      intronic chr22:17637722(-) A-I      intronic chr22:17637713(-) A-I      intronic chr22:17631622(-) A-I      intronic chr22:17631605(-) A-I      intronic chr22:17631587(-) A-I      intronic chr22:17631505(-) A-I      intronic chr22:17620727(-) A-I      intronic chr22:17620724(-) A-I      intronic chr22:17620645(-) A-I      intronic chr22:17620639(-) A-I      intronic chr22:17620638(-) A-I      intronic chr22:17620630(-) A-I      intronic chr22:17620585(-) A-I      intronic chr22:17620569(-) A-I      intronic chr22:17620566(-) A-I      intronic chr22:17620561(-) A-I      intronic chr22:17635116(-) A-I      intronic chr22:17632538(-) A-I      intronic chr22:17631586(-) A-I      intronic chr22:17631582(-) A-I      intronic chr22:17626421(-) A-I      intronic chr22:17637727(-) A-I      intronic chr22:17637844(-) A-I      intronic chr22:17625280(-) A-I      intronic chr22:17625264(-) A-I      intronic chr22:17639089(-) A-I      intronic chr22:17639039(-) A-I      intronic chr22:17639031(-) A-I      intronic chr22:17638288(-) A-I      intronic chr22:17638196(-) A-I      intronic chr22:17637868(-) A-I      intronic chr22:17636407(-) A-I      intronic chr22:17636402(-) A-I      intronic chr22:17636264(-) A-I      intronic chr22:17636238(-) A-I      intronic chr22:17635368(-) A-I      intronic chr22:17620246(-) A-I      intronic chr22:17620697(-) A-I      intronic chr22:17620681(-) A-I      intronic chr22:17620659(-) A-I      intronic chr22:17620631(-) A-I      intronic chr22:17620531(-) A-I      intronic chr22:17635216(-) A-I      intronic chr22:17635210(-) A-I      intronic chr22:17638245(-) A-I      intronic chr22:17635248(-) A-I      intronic chr22:17635250(-) A-I      intronic chr22:17635201(-) A-I      intronic chr22:17634984(-) A-I      intronic chr22:17634937(-) A-I      intronic chr22:17632587(-) A-I      intronic chr22:17632520(-) A-I      intronic chr22:17632498(-) A-I      intronic chr22:17632472(-) A-I      intronic chr22:17632471(-) A-I      intronic chr22:17632415(-) A-I      intronic chr22:17631627(-) A-I      intronic chr22:17631612(-) A-I      intronic chr22:17631520(-) A-I      intronic chr22:17631472(-) A-I      intronic chr22:17630919(-) A-I      intronic chr22:17625286(-) A-I      intronic chr22:17620252(-) A-I      intronic chr22:17632403(-) A-I      intronic chr22:17638230(-) A-I      intronic chr22:17620687(-) A-I      intronic chr22:17639185(-) A-I      intronic chr22:17623098(-) A-I      intronic chr22:17620306(-) A-I      intronic chr22:17631511(-) A-I      intronic chr22:17623100(-) A-I      intronic chr22:17634994(-) A-I      intronic chr22:17620627(-) A-I      intronic chr22:17636228(-) A-I      intronic chr22:17637628(-) A-I      intronic chr22:17620355(-) A-I      intronic chr22:17637955(-) A-I      intronic chr22:17623048(-) A-I      intronic chr22:17621392(-) A-I      intronic chr22:17632402(-) A-I      intronic chr22:17632607(-) A-I      intronic chr22:17636408(-) A-I      intronic chr22:17631517(-) A-I      intronic chr22:17621413(-) A-I      intronic chr22:17631642(-) A-I      intronic chr22:17631546(-) A-I      intronic chr22:17631641(-) A-I      intronic chr22:17639173(-) A-I      intronic chr22:17639164(-) A-I      intronic chr22:17620732(-) A-I      intronic chr22:17623063(-) A-I      intronic chr22:17638253(-) A-I      intronic chr22:17638252(-) A-I      intronic chr22:17637892(-) A-I      intronic chr22:17639154(-) A-I      intronic chr22:17639062(-) A-I      intronic chr22:17631610(-) A-I      intronic chr22:17620335(-) A-I      intronic chr22:17636274(-) A-I      intronic chr22:17625713(-) A-I      intronic chr22:17638293(-) A-I      intronic chr22:17631573(-) A-I      intronic chr22:17630932(-) A-I      intronic chr22:17631553(-) A-I      intronic chr22:17634838(-) A-I      intronic chr22:17625393(-) A-I      intronic chr22:17631681(-) A-I      intronic chr22:17635641(-) A-I      intronic chr22:17621375(-) A-I      intronic chr22:17632363(-) A-I      intronic chr22:17631636(-) A-I      intronic chr22:17635129(-) A-I      intronic chr22:17635286(-) A-I      intronic chr22:17638294(-) A-I      intronic chr22:17637820(-) A-I      intronic chr22:17626498(-) A-I      intronic chr22:17634884(-) A-I      intronic chr22:17638959(-) A-I      intronic chr22:17620371(-) A-I      intronic chr22:17632594(-) A-I      intronic chr22:17631690(-) A-I      intronic chr22:17638954(-) A-I      intronic chr22:17620269(-) A-I      intronic chr22:17620556(-) A-I      intronic chr22:17631547(-) A-I      intronic chr22:17620167(-) A-I      intronic chr22:17631565(-) A-I      intronic chr22:17620278(-) A-I      intronic chr22:17620201(-) A-I      intronic chr22:17631628(-) A-I      intronic chr22:17639204(-) A-I      intronic chr22:17635156(-) A-I      intronic chr22:17634919(-) A-I      intronic chr22:17639129(-) A-I      intronic chr22:17635008(-) A-I      intronic chr22:17620560(-) A-I      intronic chr22:17635651(-) A-I      intronic chr22:17632544(-) A-I      intronic chr22:17637819(-) A-I      intronic chr22:17630955(-) A-I      intronic chr22:17625623(-) A-I      intronic chr22:17631537(-) A-I      intronic chr22:17635605(-) A-I      intronic chr22:17635300(-) A-I      intronic chr22:17634913(-) A-I      intronic chr22:17630918(-) A-I      intronic chr22:17637885(-) A-I      intronic chr22:17636330(-) A-I      intronic chr22:17632563(-) A-I      intronic chr22:17631682(-) A-I      intronic chr22:17637846(-) A-I      intronic chr22:17635788(-) A-I      intronic chr22:17620619(-) A-I      intronic chr22:17635575(-) A-I      intronic

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	HDHD5	Chromatin K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H2-3p
Interactor2: HDHD5

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg