Basic Information:

  VIRBase ID:  

VHID00080141

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H2-3p:  MIMAT0008399          ARL6IP1:  NM_015161     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H2-3p	ARL6IP1
miRBase Accession/Entrez ID	MIMAT0008399	23204
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AIP1//ARL6IP//ARMER//SPG61

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ARL6IP1	chr16:18810528(-) A-I      intronic chr16:18805412(-) A-I      intronic chr16:18811347(-) A-I      intronic chr16:18810571(-) A-I      intronic chr16:18811344(-) A-I      intronic chr16:18806488(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ARL6IP1	chr16:18803028-18803029(-) Y 3'UTR       25219674 chr16:18803373-18803374(-) m6A 3'UTR       26404942 chr16:18804355-18804356(-) m6A 3'UTR       22575960 chr16:18804433-18804434(-) m6A 3'UTR       22575960 chr16:18810129-18810130(-) m6A 5'UTR//CDS//exon       22575960 chr16:18810146-18810147(-) m6A 5'UTR//CDS//exon       22575960 chr16:18812583-18812584(-) m6A 5'UTR//intron       22575960 chr16:18812804-18812805(-) m6A 5'UTR//exon       22575960 chr16:18812836-18812837(-) m6A 5'UTR//exon       22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ARL6IP1	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H2-3p
Interactor2: ARL6IP1

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg