Basic Information:

  VIRBase ID:  

VHID00077896

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H2-5p:  MIMAT0008398          USH1G:  NM_173477     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H2-5p	USH1G
miRBase Accession/Entrez ID	MIMAT0008398	124590
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ANKS4A//SANS

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	USH1G	chr17:72913742-72913743(-) m6A 3'UTR       25456834//22608085 chr17:72913852-72913853(-) m6A 3'UTR       25456834//24981863//22608085 chr17:72913895-72913896(-) m6A 3'UTR       25456834//24981863//22608085 chr17:72913903-72913904(-) m6A 3'UTR       25456834//24981863//22608085 chr17:72913962-72913963(-) m6A 3'UTR       25456834//24981863//22608085 chr17:72914054-72914055(-) m6A 3'UTR       25456834//22608085 chr17:72915722-72915723(-) m6A 3'UTR//CDS       25456834//27773536//22608085 chr17:72915750-72915751(-) m6A 3'UTR//CDS       25456834//27773536//22608085 chr17:72915765-72915766(-) m6A 3'UTR//CDS       25456834//27773536//22608085 chr17:72915779-72915780(-) m6A 3'UTR//CDS       25456834//24981863//27773536//22608085 chr17:72915836-72915837(-) m6A 3'UTR//CDS       25456834//24981863//27773536//22608085 chr17:72915946-72915947(-) m6A 3'UTR//CDS       25456834//24981863//27773536//22608085 chr17:72916290-72916291(-) m6A 3'UTR//CDS       27773536 chr17:72916520-72916521(-) m6A 3'UTR//CDS       25456834//24981863//27773536//22608085 chr17:72916577-72916578(-) m6A CDS       25456834//24981863//22608085 chr17:72916622-72916623(-) m6A CDS       25456834//22608085 chr17:72916646-72916647(-) m6A CDS       22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	USH1G	Chromatin K562 cells     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H2-5p
Interactor2: USH1G

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg