Basic Information:

  VIRBase ID:  

VHID00077847

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H2-5p:  MIMAT0008398          ZNF347:  NM_032584     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H2-5p	ZNF347
miRBase Accession/Entrez ID	MIMAT0008398	84671
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ZNF1111

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZNF347	chr19:53658677(-) A-I      intronic chr19:53654069(-) A-I      intronic chr19:53654050(-) A-I      intronic chr19:53658680(-) A-I      intronic chr19:53654170(-) A-I      intronic chr19:53654040(-) A-I      intronic chr19:53658683(-) A-I      intronic chr19:53654098(-) A-I      intronic chr19:53654131(-) A-I      intronic chr19:53654172(-) A-I      intronic chr19:53654175(-) A-I      intronic chr19:53654211(-) A-I      intronic chr19:53654265(-) A-I      intronic chr19:53654266(-) A-I      intronic chr19:53654595(-) A-I      intronic chr19:53654621(-) A-I      intronic chr19:53654674(-) A-I      intronic chr19:53654679(-) A-I      intronic chr19:53655300(-) A-I      intronic chr19:53659520(-) A-I      intronic chr19:53659486(-) A-I      intronic chr19:53658789(-) A-I      intronic chr19:53655939(-) A-I      intronic chr19:53655716(-) A-I      intronic chr19:53655705(-) A-I      intronic chr19:53655688(-) A-I      intronic chr19:53655687(-) A-I      intronic chr19:53655680(-) A-I      intronic chr19:53655616(-) A-I      intronic chr19:53649366(-) A-I      intronic chr19:53654186(-) A-I      intronic chr19:53655299(-) A-I      intronic chr19:53655222(-) A-I      intronic chr19:53655091(-) A-I      intronic chr19:53654078(-) A-I      intronic chr19:53654064(-) A-I      intronic chr19:53654055(-) A-I      intronic chr19:53650809(-) A-I      intronic chr19:53650743(-) A-I      intronic chr19:53650581(-) A-I      intronic chr19:53650565(-) A-I      intronic chr19:53650552(-) A-I      intronic chr19:53650411(-) A-I      intronic chr19:53649639(-) A-I      intronic chr19:53647987(-) A-I      intronic chr19:53654082(-) A-I      intronic chr19:53643256(-) A-I      3'UTR chr19:53643265(-) A-I      3'UTR chr19:53649775(-) A-I      intronic chr19:53654130(-) A-I      intronic chr19:53658750(-) A-I      intronic chr19:53658269(-) A-I      intronic chr19:53654085(-) A-I      intronic chr19:53654121(-) A-I      intronic chr19:53659389(-) A-I      intronic chr19:53657634(-) A-I      intronic chr19:53658441(-) A-I      intronic chr19:53654282(-) A-I      intronic chr19:53658770(-) A-I      intronic chr19:53649596(-) A-I      intronic chr19:53654171(-) A-I      intronic chr19:53658659(-) A-I      intronic chr19:53655224(-) A-I      intronic chr19:53655927(-) A-I      intronic chr19:53654728(-) A-I      intronic chr19:53649256(-) A-I      intronic chr19:53658464(-) A-I      intronic chr19:53649250(-) A-I      intronic chr19:53649643(-) A-I      intronic chr19:53658846(-) A-I      intronic chr19:53648298(-) A-I      intronic chr19:53648033(-) A-I      intronic chr19:53655853(-) A-I      intronic chr19:53659448(-) A-I      intronic chr19:53654532(-) A-I      intronic chr19:53659651(-) A-I      intronic chr19:53658696(-) A-I      intronic chr19:53654196(-) A-I      intronic chr19:53658418(-) A-I      intronic chr19:53650689(-) A-I      intronic chr19:53654599(-) A-I      intronic chr19:53658839(-) A-I      intronic chr19:53657626(-) A-I      intronic chr19:53650759(-) A-I      intronic chr19:53658754(-) A-I      intronic chr19:53659540(-) A-I      intronic chr19:53648017(-) A-I      intronic chr19:53658860(-) A-I      intronic chr19:53658763(-) A-I      intronic chr19:53654783(-) A-I      intronic chr19:53647999(-) A-I      intronic chr19:53661891(-) A-I      intronic chr19:53658867(-) A-I      intronic chr19:53648937(-) A-I      intronic chr19:53658761(-) A-I      intronic chr19:53658442(-) A-I      intronic chr19:53658854(-) A-I      intronic chr19:53655227(-) A-I      intronic chr19:53654244(-) A-I      intronic chr19:53643318(-) A-I      3'UTR chr19:53661994(-) A-I      5'UTR chr19:53661946(-) A-I      5'UTR chr19:53658701(-) A-I      intronic chr19:53654624(-) A-I      intronic chr19:53648734(-) A-I      intronic chr19:53649679(-) A-I      intronic chr19:53648814(-) A-I      intronic chr19:53648815(-) A-I      intronic chr19:53659469(-) A-I      intronic chr19:53643314(-) A-I      3'UTR chr19:53658783(-) A-I      intronic chr19:53658682(-) A-I      intronic chr19:53657484(-) A-I      intronic chr19:53657566(-) A-I      intronic chr19:53654163(-) A-I      intronic chr19:53655774(-) A-I      intronic chr19:53654197(-) A-I      intronic chr19:53659650(-) A-I      intronic chr19:53659598(-) A-I      intronic chr19:53650699(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ZNF347	chr19:53643256(-) A-I exon 3'UTR    21960545 chr19:53643314(-) A-G exon 3'UTR    22484847 chr19:53643318(-) A-G exon 3'UTR    22484847 chr19:53649679(-) A-G intron -    22484847 chr19:53654599(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF347	chr19:53642396-53642397(-) m6A 3'UTR//intron       27773535 chr19:53642404-53642405(-) m6A 3'UTR//intron       27773535 chr19:53642455-53642456(-) m6A 3'UTR//intron       27773535 chr19:53642510-53642511(-) m6A 3'UTR//intron       27773535 chr19:53642541-53642542(-) m6A 3'UTR//intron       27773535 chr19:53642580-53642581(-) m6A 3'UTR//intron       24981863//27773535 chr19:53642649-53642650(-) m6A 3'UTR//intron       24981863//27773535 chr19:53642711-53642712(-) m6A 3'UTR//intron       24981863//27773535 chr19:53642808-53642809(-) m6A 3'UTR//intron       24981863//27773535 chr19:53642834-53642835(-) m6A 3'UTR//intron       24981863//27773535 chr19:53642841-53642842(-) m6A 3'UTR//intron       24209618//24981863//27773535 chr19:53642875-53642876(-) m6A 3'UTR//intron       24209618//24981863//27773535 chr19:53642950-53642951(-) m6A 3'UTR//intron       24209618//24981863//27773535 chr19:53642998-53642999(-) m6A 3'UTR//intron       24209618//24981863//27773535 chr19:53643108-53643109(-) m6A 3'UTR//intron       24981863//27773535 chr19:53643135-53643136(-) m6A 3'UTR//intron       24981863//27773535 chr19:53643179-53643180(-) m6A 3'UTR//intron       24981863//27773535 chr19:53643249-53643250(-) m6A 3'UTR//intron       27773535 chr19:53643345-53643346(-) m6A 3'UTR//intron       24209618 chr19:53643368-53643369(-) m6A 3'UTR//intron       24209618 chr19:53643550-53643551(-) m6A 3'UTR//intron       27773535 chr19:53643587-53643588(-) m6A CDS//intron       27773535 chr19:53643632-53643633(-) m6A CDS//intron       27773535 chr19:53643652-53643653(-) m6A CDS//intron       27773535 chr19:53643689-53643690(-) m6A CDS//intron       27773535 chr19:53643707-53643708(-) m6A CDS//intron       27773535 chr19:53643743-53643744(-) m6A CDS//intron       27773535 chr19:53643751-53643752(-) m6A CDS//intron       27773535 chr19:53643791-53643792(-) m6A CDS//intron       27773535 chr19:53643818-53643819(-) m6A CDS//intron       27773535 chr19:53643875-53643876(-) m6A CDS//intron       27773535 chr19:53643959-53643960(-) m6A CDS//intron       27773535 chr19:53644003-53644004(-) m6A CDS//intron       27773535 chr19:53644043-53644044(-) m6A CDS//intron       27773535 chr19:53644070-53644071(-) m6A CDS//intron       27773535 chr19:53644127-53644128(-) m6A CDS//intron       24981863//27773535 chr19:53644164-53644165(-) m6A CDS//intron       24981863//27773535 chr19:53644172-53644173(-) m6A CDS//intron       24981863//27773535 chr19:53644211-53644212(-) m6A CDS//intron       24981863//27773535 chr19:53644295-53644296(-) m6A CDS//intron       27773535 chr19:53644322-53644323(-) m6A CDS//intron       27773535 chr19:53644379-53644380(-) m6A CDS//intron       27773535 chr19:53644584-53644585(-) m6A CDS//intron       27773535 chr19:53644631-53644632(-) m6A CDS//intron       27773535 chr19:53645051-53645052(-) m6A CDS//intron       27773535 chr19:53645172-53645173(-) m6A CDS//intron       27773535 chr19:53645182-53645183(-) m6A CDS//intron       27773535 chr19:53645219-53645220(-) m6A CDS//intron       27773535 chr19:53645386-53645387(-) m6A CDS//intron       27773535 chr19:53645498-53645499(-) m6A CDS//intron       24981863//27773535 chr19:53645550-53645551(-) m6A CDS//intron       24981863//27773535 chr19:53645573-53645574(-) m6A CDS//intron       24981863//27773535 chr19:53645706-53645707(-) m6A CDS//intron       24981863 chr19:53645720-53645721(-) m6A CDS//intron       24981863 chr19:53645737-53645738(-) m6A CDS//intron       24981863 chr19:53652302-53652303(-) m6A exon//intron       27773535 chr19:53652349-53652350(-) m6A exon//intron       27773535 chr19:53652507-53652508(-) m6A CDS//exon//intron       27773535 chr19:53652544-53652545(-) m6A 5'UTR//CDS//exon//intron       - chr19:53652558-53652559(-) m6A 5'UTR//CDS//exon//intron       27773535 chr19:53652568-53652569(-) m6A 5'UTR//CDS//exon//intron       27773535 chr19:53652617-53652618(-) m6A 5'UTR//CDS//exon//intron       25456834//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZNF347	Chromatin K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H2-5p
Interactor2: ZNF347

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg