Detail Information

Basic Information:


  VIRBase ID:  

VHID00077831

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H2-5p:           HASPIN:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H2-5p HASPIN
miRBase
Accession/Entrez ID
MIMAT0008398 83903
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - GSG2

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR HASPIN
chr17:3629866(+) A-I      3'UTR
chr17:3629850(+) A-I      3'UTR
chr17:3629872(+) A-I      3'UTR
chr17:3629876(+) A-I      3'UTR

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate HASPIN
Chromatin K562 cells     -
Exosome Cerebrospinal fluid     25420022
Exosome Blood     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H2-5p
Interactor2: HASPIN

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid//Targetscan
Support Database VmiReg

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