Basic Information:

  VIRBase ID:  

VHID00077796

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H2-5p:  MIMAT0008398          TMEM204:  NM_024600     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H2-5p	TMEM204
miRBase Accession/Entrez ID	MIMAT0008398	79652
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C16orf30//CLP24

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TMEM204	chr16:1583649-1583650(+) m6A 5'UTR//intron       - chr16:1583661-1583662(+) m6A 5'UTR//intron       - chr16:1583746-1583747(+) m6A 5'UTR//intron       - chr16:1583806-1583807(+) m6A 5'UTR//intron       - chr16:1584129-1584130(+) m6A 5'UTR       - chr16:1584229-1584230(+) m6A 5'UTR       - chr16:1584235-1584236(+) m6A 5'UTR       - chr16:1584290-1584291(+) m6A CDS       24981863 chr16:1584433-1584434(+) m6A CDS       24981863 chr16:1584438-1584439(+) m6A CDS       24981863 chr16:1604860-1604861(+) m6A CDS       - chr16:1604911-1604912(+) m6A CDS       - chr16:1604932-1604933(+) m6A CDS       - chr16:1604998-1604999(+) m6A CDS       - chr16:1605072-1605073(+) m6A 3'UTR       - chr16:1605083-1605084(+) m6A 3'UTR       - chr16:1605091-1605092(+) m6A 3'UTR       - chr16:1605170-1605171(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TMEM204	Exosome Blood     - Nucleolus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H2-5p
Interactor2: TMEM204

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg