Basic Information:

  VIRBase ID:  

VHID00077740

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H2-5p:  MIMAT0008398          DPYSL5:  NM_001253724     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H2-5p	DPYSL5
miRBase Accession/Entrez ID	MIMAT0008398	56896
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CRAM//CRMP-5//CRMP5//CV2//Ulip6

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DPYSL5	chr2:27105347(+) A-I      intronic chr2:27105335(+) A-I      intronic chr2:27080287(+) A-I      intronic chr2:27166405(+) A-I      intronic chr2:27166393(+) A-I      intronic chr2:27166392(+) A-I      intronic chr2:27159662(+) A-I      intronic chr2:27111305(+) A-I      intronic chr2:27080314(+) A-I      intronic chr2:27159693(+) A-I      intronic chr2:27104756(+) A-I      intronic chr2:27115535(+) A-I      intronic chr2:27158300(+) A-I      intronic chr2:27159565(+) A-I      intronic chr2:27159618(+) A-I      intronic chr2:27104916(+) A-I      intronic chr2:27086992(+) A-I      intronic chr2:27105255(+) A-I      intronic chr2:27162110(+) A-I      intronic chr2:27115449(+) A-I      intronic chr2:27111322(+) A-I      intronic chr2:27088338(+) A-I      intronic chr2:27118790(+) A-I      intronic chr2:27106298(+) A-I      intronic chr2:27160848(+) A-I      intronic chr2:27152201(+) A-I      intronic chr2:27158370(+) A-I      intronic chr2:27081463(+) A-I      intronic chr2:27130196(+) A-I      intronic chr2:27078042(+) A-I      intronic chr2:27146622(+) A-I      intronic chr2:27076817(+) A-I      intronic chr2:27163905(+) A-I      intronic chr2:27076863(+) A-I      intronic chr2:27118828(+) A-I      intronic chr2:27076758(+) A-I      intronic chr2:27162191(+) A-I      intronic chr2:27118729(+) A-I      intronic chr2:27104848(+) A-I      intronic chr2:27151315(+) A-I      intronic chr2:27162130(+) A-I      intronic chr2:27074692(+) A-I      intronic chr2:27115473(+) A-I      intronic chr2:27162109(+) A-I      intronic chr2:27160662(+) A-I      intronic chr2:27107912(+) A-I      intronic chr2:27114721(+) A-I      intronic chr2:27111194(+) A-I      intronic chr2:27158478(+) A-I      intronic chr2:27158377(+) A-I      intronic chr2:27105370(+) A-I      intronic chr2:27087123(+) A-I      intronic chr2:27159564(+) A-I      intronic chr2:27088385(+) A-I      intronic chr2:27171548(+) A-I      3'UTR chr2:27171636(+) A-I      3'UTR chr2:27105243(+) A-I      intronic chr2:27105217(+) A-I      intronic chr2:27104787(+) A-I      intronic chr2:27105178(+) A-I      intronic chr2:27078048(+) A-I      intronic chr2:27163885(+) A-I      intronic chr2:27160696(+) A-I      intronic chr2:27080127(+) A-I      intronic chr2:27104804(+) A-I      intronic chr2:27092713(+) A-I      intronic chr2:27158472(+) A-I      intronic chr2:27160695(+) A-I      intronic chr2:27105438(+) A-I      intronic chr2:27162217(+) A-I      intronic chr2:27086971(+) A-I      intronic chr2:27081487(+) A-I      intronic chr2:27105339(+) A-I      intronic chr2:27105218(+) A-I      intronic chr2:27104967(+) A-I      intronic chr2:27114645(+) A-I      intronic chr2:27105175(+) A-I      intronic chr2:27114716(+) A-I      intronic chr2:27114751(+) A-I      intronic chr2:27105253(+) A-I      intronic chr2:27104838(+) A-I      intronic chr2:27114803(+) A-I      intronic chr2:27081478(+) A-I      intronic chr2:27159658(+) A-I      intronic chr2:27080393(+) A-I      intronic chr2:27105183(+) A-I      intronic chr2:27106529(+) A-I      intronic chr2:27105701(+) A-I      intronic chr2:27162188(+) A-I      intronic chr2:27162085(+) A-I      intronic chr2:27105432(+) A-I      intronic chr2:27158410(+) A-I      intronic chr2:27111278(+) A-I      intronic chr2:27092785(+) A-I      intronic chr2:27074666(+) A-I      intronic chr2:27158489(+) A-I      intronic chr2:27099477(+) A-I      intronic chr2:27080395(+) A-I      intronic chr2:27143486(+) A-I      intronic chr2:27077200(+) A-I      intronic chr2:27105583(+) A-I      intronic chr2:27086976(+) A-I      intronic chr2:27102269(+) A-I      intronic chr2:27163944(+) A-I      intronic chr2:27092791(+) A-I      intronic chr2:27094411(+) A-I      intronic chr2:27118845(+) A-I      intronic chr2:27092061(+) A-I      intronic chr2:27106541(+) A-I      intronic chr2:27104731(+) A-I      intronic chr2:27080261(+) A-I      intronic chr2:27111342(+) A-I      intronic chr2:27114724(+) A-I      intronic chr2:27126119(+) A-I      intronic chr2:27076895(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	DPYSL5	chr2:27104704(+) A-I intron -    15342557   //15258596 chr2:27104731(+) A-I intron -    15342557   //15258596 chr2:27104756(+) A-I intron -    15342557   //15258596 chr2:27104787(+) A-I intron -    15342557   //15258596 chr2:27104838(+) A-I intron -    15342557 chr2:27104868(+) A-I intron -    15342557 chr2:27104916(+) A-I intron -    15342557 chr2:27104967(+) A-I intron -    15342557 chr2:27162049(+) A-I intron -    15342557 chr2:27162085(+) A-I intron -    15342557 chr2:27162130(+) A-I intron -    15342557 chr2:27162135(+) A-I intron -    15342557 chr2:27162145(+) A-I intron -    15342557 chr2:27162188(+) A-I intron -    15342557

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DPYSL5	chr2:27121365-27121366(+) m6A 5'UTR       - chr2:27121534-27121535(+) m6A CDS       - chr2:27121580-27121581(+) m6A CDS       - chr2:27121622-27121623(+) m6A CDS       - chr2:27169985-27169986(+) m6A 3'UTR//exon       24981863 chr2:27170208-27170209(+) m6A 3'UTR//exon       24284625//24981863 chr2:27170330-27170331(+) m6A 3'UTR//exon       24284625 chr2:27171008-27171009(+) m6A 3'UTR//exon       25456834//24981863 chr2:27171014-27171015(+) m6A 3'UTR//exon       25456834//24981863 chr2:27171092-27171093(+) m6A 3'UTR//exon       24284625 chr2:27171107-27171108(+) m6A 3'UTR//exon       24284625 chr2:27171123-27171124(+) m6A 3'UTR//exon       24284625 chr2:27171136-27171137(+) m6A 3'UTR//exon       24284625 chr2:27171645-27171646(+) m6A 3'UTR//exon       24981863 chr2:27171714-27171715(+) m6A 3'UTR//exon       24981863 chr2:27171729-27171730(+) m6A 3'UTR       24981863 chr2:27171737-27171738(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	DPYSL5	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841 Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H2-5p
Interactor2: DPYSL5

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg