Basic Information:

  VIRBase ID:  

VHID00077452

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H2-5p:  MIMAT0008398          SLC25A1:  NR_046298     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H2-5p	SLC25A1
miRBase Accession/Entrez ID	MIMAT0008398	6576
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CMS23//CTP//D2L2AD//SEA//SLC20A3

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SLC25A1	chr22:19163108-19163109(-) m6A 3'UTR       27773535 chr22:19163131-19163132(-) m6A 3'UTR//exon       27773535 chr22:19163157-19163158(-) m6A 3'UTR//exon       27773535 chr22:19163620-19163621(-) m6A 3'UTR//exon       22575960 chr22:19163646-19163647(-) m6A CDS//exon       22575960 chr22:19163972-19163973(-) m6A CDS//exon       27773535 chr22:19163981-19163982(-) m6A CDS//exon       27773535 chr22:19164101-19164102(-) m6A CDS//exon       27773535 chr22:19164124-19164125(-) m6A CDS//exon       27773535 chr22:19164181-19164182(-) m6A CDS//exon       27773535 chr22:19164202-19164203(-) m6A CDS//exon       27773535 chr22:19164408-19164409(-) m6A CDS//exon       - chr22:19164636-19164637(-) m6A CDS//exon       - chr22:19164685-19164686(-) m6A CDS//exon       - chr22:19164695-19164696(-) m6A CDS//exon       - chr22:19165247-19165248(-) m6A CDS//exon       - chr22:19165321-19165322(-) m6A CDS//exon       - chr22:19165476-19165477(-) Y 5'UTR//CDS//exon       25219674//26075521 chr22:19165550-19165551(-) m6A 5'UTR//CDS//exon       24284625 chr22:19166224-19166225(-) m6A 5'UTR//exon       24209618//25456834//24981863//27371828//27773536 chr22:19166251-19166252(-) m6A 5'UTR//exon       24209618//25456834//24981863//27371828//27773536 chr22:19166280-19166281(-) m6A 5'UTR       24209618//25456834//24981863//27371828//27773536 chr22:19166313-19166314(-) m6A 5'UTR       25456834//24981863 chr22:19166328-19166329(-) m6A 5'UTR       25456834//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SLC25A1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H2-5p
Interactor2: SLC25A1

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg