Basic Information:

  VIRBase ID:  

VHID00077440

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H2-5p:  MIMAT0008398          SCNN1D:  NR_037668     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H2-5p	SCNN1D
miRBase Accession/Entrez ID	MIMAT0008398	6339
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	dNaCh//ENaCd//ENaCdelta//SCNED

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SCNN1D	chr1:1215723(+) A-I      intronic chr1:1212031(+) A-I      intronic chr1:1215697(+) A-I      intronic chr1:1213714(+) A-I      intronic chr1:1218234(+) A-I      intronic chr1:1218213(+) A-I      intronic chr1:1215701(+) A-I      intronic chr1:1219074(+) A-I      intronic chr1:1215804(+) A-I      intronic chr1:1218272(+) A-I      intronic chr1:1214967(+) A-I      intronic chr1:1215058(+) A-I      intronic chr1:1218958(+) A-I      intronic chr1:1214922(+) A-I      intronic chr1:1211920(+) A-I      intronic chr1:1218823(+) A-I      intronic chr1:1211952(+) A-I      intronic chr1:1212776(+) A-I      intronic chr1:1216556(+) A-I      5'UTR chr1:1212564(+) A-I      intronic chr1:1218864(+) A-I      intronic chr1:1214900(+) A-I      intronic chr1:1211988(+) A-I      intronic chr1:1218274(+) A-I      intronic chr1:1214056(+) A-I      intronic chr1:1215765(+) A-I      intronic chr1:1212601(+) A-I      intronic chr1:1215562(+) A-I      intronic chr1:1215589(+) A-I      intronic chr1:1218262(+) A-I      intronic chr1:1214948(+) A-I      intronic chr1:1212675(+) A-I      intronic chr1:1213636(+) A-I      intronic chr1:1215540(+) A-I      intronic chr1:1218957(+) A-I      intronic chr1:1213678(+) A-I      intronic chr1:1213628(+) A-I      intronic chr1:1215590(+) A-I      intronic chr1:1213556(+) A-I      intronic chr1:1214964(+) A-I      intronic chr1:1212955(+) A-I      intronic chr1:1215451(+) A-I      intronic chr1:1214974(+) A-I      intronic chr1:1220391(+) A-I      intronic chr1:1213023(+) A-I      intronic chr1:1215636(+) A-I      intronic chr1:1215056(+) A-I      intronic chr1:1215496(+) A-I      intronic chr1:1218406(+) A-I      intronic chr1:1213587(+) A-I      intronic chr1:1214912(+) A-I      intronic chr1:1213533(+) A-I      intronic chr1:1218908(+) A-I      intronic chr1:1214909(+) A-I      intronic chr1:1215478(+) A-I      intronic chr1:1213534(+) A-I      intronic chr1:1212685(+) A-I      intronic chr1:1218967(+) A-I      intronic chr1:1213934(+) A-I      intronic chr1:1212520(+) A-I      intronic chr1:1214949(+) A-I      intronic chr1:1213642(+) A-I      intronic chr1:1215445(+) A-I      intronic chr1:1219093(+) A-I      intronic chr1:1218846(+) A-I      intronic chr1:1213033(+) A-I      intronic chr1:1218923(+) A-I      intronic chr1:1215750(+) A-I      intronic chr1:1215452(+) A-I      intronic chr1:1213669(+) A-I      intronic chr1:1215657(+) A-I      intronic chr1:1218931(+) A-I      intronic chr1:1215837(+) A-I      5'UTR chr1:1211912(+) A-I      intronic chr1:1213515(+) A-I      intronic chr1:1214989(+) A-I      intronic chr1:1212956(+) A-I      intronic chr1:1215503(+) A-I      intronic chr1:1212594(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SCNN1D	chr1:1216928-1216929(+) m6A 5'UTR//CDS       - chr1:1216986-1216987(+) m6A 5'UTR//CDS       - chr1:1221007-1221008(+) m6A CDS//intron       - chr1:1221034-1221035(+) m6A CDS//intron       - chr1:1226975-1226976(+) m6A CDS       - chr1:1226982-1226983(+) m6A CDS       - chr1:1226990-1226991(+) m6A 3'UTR       - chr1:1226995-1226996(+) m6A 3'UTR       - chr1:1227078-1227079(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SCNN1D	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H2-5p
Interactor2: SCNN1D

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid
Support Database	VmiReg