Basic Information:

  VIRBase ID:  

VHID00077408

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H2-5p:  MIMAT0008398          PAX3:  NM_013942     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H2-5p	PAX3
miRBase Accession/Entrez ID	MIMAT0008398	5077
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CDHS//HUP2//WS1//WS3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PAX3	chr2:223125292(-) A-I      intronic chr2:223075684(-) A-I      intronic chr2:223087395(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PAX3	chr2:223065840-223065841(-) m6A 3'UTR       24981863 chr2:223065888-223065889(-) m6A 3'UTR       24981863 chr2:223065905-223065906(-) m6A 3'UTR//CDS       24981863 chr2:223065938-223065939(-) m6A 3'UTR//CDS       24981863 chr2:223065993-223065994(-) m6A 3'UTR//intron       24981863 chr2:223066048-223066049(-) m6A 3'UTR//intron       24981863 chr2:223066101-223066102(-) m6A 3'UTR//intron       24981863 chr2:223066121-223066122(-) m6A 3'UTR//intron       24981863 chr2:223066613-223066614(-) m6A 3'UTR//intron       24981863 chr2:223066650-223066651(-) m6A CDS//intron       24981863 chr2:223066666-223066667(-) m6A CDS//intron       24981863 chr2:223066700-223066701(-) m6A CDS//exon//intron       24981863 chr2:223096867-223096868(-) m6A CDS       24981863 chr2:223096889-223096890(-) m6A CDS       24981863 chr2:223096901-223096902(-) m6A CDS       24981863 chr2:223096918-223096919(-) m6A CDS       24981863 chr2:223096934-223096935(-) m6A CDS       24981863 chr2:223096958-223096959(-) m6A CDS       24981863 chr2:223158916-223158917(-) m6A CDS       24981863 chr2:223163491-223163492(-) m6A 5'UTR       27773536 chr2:223163498-223163499(-) m6A 5'UTR       27773536 chr2:223163551-223163552(-) m6A 5'UTR       27773536 chr2:223163580-223163581(-) m6A 5'UTR       27773536 chr2:223163591-223163592(-) m6A 5'UTR       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PAX3	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H2-5p
Interactor2: PAX3

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg