Basic Information:

  VIRBase ID:  

VHID00077363

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H2-5p:  MIMAT0008398          IGFBP4:  NM_001552     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H2-5p	IGFBP4
miRBase Accession/Entrez ID	MIMAT0008398	3487
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BP-4//HT29-IGFBP//IBP4//IGFBP-4

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	IGFBP4	chr17:38608177(+) A-I      intronic chr17:38608194(+) A-I      intronic chr17:38608245(+) A-I      intronic chr17:38607012(+) A-I      intronic chr17:38607024(+) A-I      intronic chr17:38607038(+) A-I      intronic chr17:38602817(+) A-I      intronic chr17:38607042(+) A-I      intronic chr17:38608128(+) A-I      intronic chr17:38608207(+) A-I      intronic chr17:38608219(+) A-I      intronic chr17:38608229(+) A-I      intronic chr17:38608325(+) A-I      intronic chr17:38608329(+) A-I      intronic chr17:38608370(+) A-I      intronic chr17:38602672(+) A-I      intronic chr17:38602721(+) A-I      intronic chr17:38602747(+) A-I      intronic chr17:38602753(+) A-I      intronic chr17:38602757(+) A-I      intronic chr17:38602774(+) A-I      intronic chr17:38602818(+) A-I      intronic chr17:38602828(+) A-I      intronic chr17:38605630(+) A-I      intronic chr17:38605781(+) A-I      intronic chr17:38605886(+) A-I      intronic chr17:38605907(+) A-I      intronic chr17:38606014(+) A-I      intronic chr17:38606359(+) A-I      intronic chr17:38606401(+) A-I      intronic chr17:38606412(+) A-I      intronic chr17:38606461(+) A-I      intronic chr17:38606499(+) A-I      intronic chr17:38606512(+) A-I      intronic chr17:38606806(+) A-I      intronic chr17:38606807(+) A-I      intronic chr17:38606811(+) A-I      intronic chr17:38606851(+) A-I      intronic chr17:38606859(+) A-I      intronic chr17:38606890(+) A-I      intronic chr17:38607039(+) A-I      intronic chr17:38606902(+) A-I      intronic chr17:38606907(+) A-I      intronic chr17:38606915(+) A-I      intronic chr17:38606916(+) A-I      intronic chr17:38606998(+) A-I      intronic chr17:38606999(+) A-I      intronic chr17:38605639(+) A-I      intronic chr17:38605989(+) A-I      intronic chr17:38602606(+) A-I      intronic chr17:38606292(+) A-I      intronic chr17:38602612(+) A-I      intronic chr17:38606526(+) A-I      intronic chr17:38606452(+) A-I      intronic chr17:38608352(+) A-I      intronic chr17:38605854(+) A-I      intronic chr17:38608247(+) A-I      intronic chr17:38606920(+) A-I      intronic chr17:38605672(+) A-I      intronic chr17:38605648(+) A-I      intronic chr17:38608364(+) A-I      intronic chr17:38605613(+) A-I      intronic chr17:38605880(+) A-I      intronic chr17:38608262(+) A-I      intronic chr17:38602635(+) A-I      intronic chr17:38605612(+) A-I      intronic chr17:38606977(+) A-I      intronic chr17:38606514(+) A-I      intronic chr17:38606441(+) A-I      intronic chr17:38602838(+) A-I      intronic chr17:38606991(+) A-I      intronic chr17:38608112(+) A-I      intronic chr17:38605951(+) A-I      intronic chr17:38605751(+) A-I      intronic chr17:38602621(+) A-I      intronic chr17:38605681(+) A-I      intronic chr17:38605746(+) A-I      intronic chr17:38606513(+) A-I      intronic chr17:38605686(+) A-I      intronic chr17:38608158(+) A-I      intronic chr17:38608106(+) A-I      intronic chr17:38602402(+) A-I      intronic chr17:38606284(+) A-I      intronic chr17:38606399(+) A-I      intronic chr17:38606487(+) A-I      intronic chr17:38605635(+) A-I      intronic chr17:38602510(+) A-I      intronic chr17:38602613(+) A-I      intronic chr17:38606308(+) A-I      intronic chr17:38606372(+) A-I      intronic chr17:38606377(+) A-I      intronic chr17:38608290(+) A-I      intronic chr17:38608328(+) A-I      intronic chr17:38608351(+) A-I      intronic chr17:38608190(+) A-I      intronic chr17:38608223(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	IGFBP4	chr17:38609329-38609330(+) m6A CDS       26404942 chr17:38610255-38610256(+) m6A CDS       24284625//26404942 chr17:38612746-38612747(+) m6A CDS       25456834//26404942 chr17:38612800-38612801(+) m6A CDS       25456834//26404942 chr17:38612855-38612856(+) m6A 3'UTR       25456834//26404942 chr17:38613078-38613079(+) m6A 3'UTR       26404942 chr17:38613084-38613085(+) m6A 3'UTR       26404942 chr17:38613183-38613184(+) m6A 3'UTR       26404942 chr17:38613271-38613272(+) m6A 3'UTR       26404942 chr17:38613341-38613342(+) m6A 3'UTR       26404942 chr17:38613440-38613441(+) m6A 3'UTR       26404942 chr17:38613459-38613460(+) m6A 3'UTR       26404942 chr17:38613583-38613584(+) m6A 3'UTR       26404942 chr17:38613661-38613662(+) m6A 3'UTR       26404942 chr17:38613684-38613685(+) m6A 3'UTR       26404942 chr17:38613767-38613768(+) m6A 3'UTR       26404942

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	IGFBP4	Chromatin K562 cells     - Cytosol HeLa-S3 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H2-5p
Interactor2: IGFBP4

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg