Basic Information:

  VIRBase ID:  

VHID00076974

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H1-5p:  MIMAT0003744          SLC46A3:  NM_001347960     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H1-5p	SLC46A3
miRBase Accession/Entrez ID	MIMAT0003744	283537
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FKSG16

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SLC46A3	chr13:29282835(-) A-I      intronic chr13:29277766(-) A-I      intronic chr13:29282825(-) A-I      intronic chr13:29282848(-) A-I      intronic chr13:29282877(-) A-I      intronic chr13:29282887(-) A-I      intronic chr13:29282893(-) A-I      intronic chr13:29282462(-) A-I      intronic chr13:29282532(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SLC46A3	chr13:29288647(-) C-T intron -    21725310

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SLC46A3	chr13:29274265-29274266(-) m6A 3'UTR//exon       27773535 chr13:29274422-29274423(-) m6A 3'UTR//exon       27773535 chr13:29274442-29274443(-) m6A 3'UTR//exon       27773535 chr13:29274516-29274517(-) m6A 3'UTR//exon       27773535 chr13:29275488-29275489(-) m6A 3'UTR//exon//intron       24981863//27773535//22608085 chr13:29275500-29275501(-) m6A 3'UTR//exon//intron       24981863//27773535//22608085 chr13:29275505-29275506(-) m6A 3'UTR//exon//intron       24981863//27773535//22608085 chr13:29275532-29275533(-) m6A 3'UTR//exon//intron       24981863//27773535//22608085 chr13:29275569-29275570(-) m6A 3'UTR//exon//intron       24981863//27773535//22608085 chr13:29275621-29275622(-) m6A 3'UTR//exon//intron       24981863//22608085 chr13:29275640-29275641(-) m6A CDS//exon       24981863//22608085 chr13:29275678-29275679(-) m6A CDS//exon       24981863 chr13:29287324-29287325(-) m6A CDS       24981863//22608085 chr13:29287333-29287334(-) m6A CDS       24981863//22608085 chr13:29287345-29287346(-) m6A CDS       24981863//22608085 chr13:29287380-29287381(-) m6A CDS       24981863//22608085 chr13:29287387-29287388(-) m6A CDS       24981863//22608085 chr13:29287393-29287394(-) m6A CDS       24981863//22608085 chr13:29292854-29292855(-) m6A 5'UTR       24981863 chr13:29292920-29292921(-) m6A 5'UTR       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hsv1-miR-H1-5p	Exosome Jurkat-derived T cell line (J77cl20)     21505438
	SLC46A3	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H1-5p
Interactor2: SLC46A3

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg