Detail Information

Basic Information:


  VIRBase ID:  

VHID00076907

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H1-5p:           ADGRF2:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H1-5p ADGRF2
miRBase
Accession/Entrez ID
MIMAT0003744 222611
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - GPR111//hGPCR35//PGR20

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ADGRF2
chr6:47656421(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ADGRF2
chr6:47649281-47649282(+) m6A CDS       -
chr6:47649413-47649414(+) m6A CDS       -
chr6:47649468-47649469(+) m6A CDS       -
chr6:47649499-47649500(+) m6A CDS       -
chr6:47649508-47649509(+) m6A CDS       -
chr6:47649538-47649539(+) m6A CDS       -
chr6:47649726-47649727(+) m6A CDS       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsv1-miR-H1-5p
Exosome Jurkat-derived T cell line (J77cl20)     21505438
ADGRF2
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H1-5p
Interactor2: ADGRF2

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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