Detail Information

Basic Information:


  VIRBase ID:  

VHID00074832

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H1-5p:           ZBTB6:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H1-5p ZBTB6
miRBase
Accession/Entrez ID
MIMAT0003744 10773
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - ZID//ZNF482

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ZBTB6
chr9:125670800-125670801(-) m6A 3'UTR       27773535
chr9:125673063-125673064(-) m6A 3'UTR       24981863//27773535//22608085
chr9:125673115-125673116(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22608085
chr9:125673230-125673231(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr9:125673239-125673240(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr9:125673267-125673268(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr9:125673310-125673311(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr9:125673351-125673352(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr9:125673379-125673380(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr9:125673407-125673408(-) m6A CDS       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr9:125673600-125673601(-) m6A CDS       24981863//27773535//22608085
chr9:125673710-125673711(-) m6A CDS       24284625//24981863//27773535//22608085
chr9:125673725-125673726(-) m6A CDS       24284625//24981863//27773535//22608085
chr9:125673833-125673834(-) m6A CDS       24284625//24981863//27773535//22608085
chr9:125673872-125673873(-) m6A CDS       24284625//24981863//27773535//22608085
chr9:125673947-125673948(-) m6A CDS       24981863//27773535//22608085
chr9:125674147-125674148(-) m6A CDS       24284625//24981863//27773535//22608085
chr9:125674270-125674271(-) m6A CDS       24284625//24981863//27773535//22608085
chr9:125674312-125674313(-) m6A CDS       24284625//24981863//27773535//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hsv1-miR-H1-5p
Exosome Jurkat-derived T cell line (J77cl20)     21505438
ZBTB6
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H1-5p
Interactor2: ZBTB6

Evidence Support:


Prediction-Evidence cRep//miRanda//Targetscan
Support Database RepTar//VmiReg

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