Basic Information:

  VIRBase ID:  

VHID00072856

  Virus:  

Gallid alphaherpesvirus 3

  Host:  

Gallus gallus

  Confidence Score:  

0.5711

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mdv2-miR-M16-3p:  MIMAT0012540          PIK3CG:  NM_001199538     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mdv2-miR-M16-3p	PIK3CG
miRBase Accession/Entrez ID	MIMAT0012540	417706
Organism	Gallid alphaherpesvirus 3	Gallus gallus
Category	miRNA	mRNA
Alias	-	-

Interaction Network (The top 100 interactions):

Interactor1: mdv2-miR-M16-3p
Interactor2: PIK3CG

Evidence Support:

Weak-Evidence	PAR-CLIP
Prediction-Evidence	PARalyzer
Support Database	VIRmiRNA

References:

PMID	24449754	Target region	CDS
Source	VIRmiRNA	Interactor1 expression	None
Tissue or cell line	MSB1 cells	Interactor2 expression	None
Description	A list of all RISC binding clusters identified, with their predicted miRNAs, is given in Table S1 in the supplemental material. Of these 16,585 binding clusters, PARalyzer predicted 1, 104 cellular mRNAs that were bound by one or more MDV-1 miRNAs, while 1, 183 cellular mRNAs were predicted to be bound by one or more MDV-2 miRNAs.