Basic Information:

  VIRBase ID:  

VHID00071259

  Virus:  

Gallid alphaherpesvirus 2

  Host:  

Homo sapiens

  Confidence Score:  

0.5711

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mdv1-miR-M8-5p:  MIMAT0005805          PSAPL1:  NM_001085382     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mdv1-miR-M8-5p	PSAPL1
miRBase Accession/Entrez ID	MIMAT0005805	768239
Organism	Gallid alphaherpesvirus 2	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PSAPL1	chr4:7435983-7435984(-) m6A CDS       24981863 chr4:7436049-7436050(-) m6A CDS       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PSAPL1	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: mdv1-miR-M8-5p
Interactor2: PSAPL1

Evidence Support:

Weak-Evidence	PAR-CLIP
Prediction-Evidence	PARalyzer
Support Database	VIRmiRNA

References:

PMID	24449754	Target region	3'UTR
Source	VIRmiRNA	Interactor1 expression	None
Tissue or cell line	MSB1 cells	Interactor2 expression	None
Description	A list of all RISC binding clusters identified, with their predicted miRNAs, is given in Table S1 in the supplemental material. Of these 16,585 binding clusters, PARalyzer predicted 1, 104 cellular mRNAs that were bound by one or more MDV-1 miRNAs, while 1, 183 cellular mRNAs were predicted to be bound by one or more MDV-2 miRNAs.