Detail Information

Basic Information:


  VIRBase ID:  

VHID00069542

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-9 GBAP1
miRBase
Accession/Entrez ID		 zikv-mir-9 2630
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA pseudo
Alias - Beta-GC//GBA//GBAP//GC//GLUC

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR GBAP1
chr1:155194276(-) A-I      intronic
chr1:155194009(-) A-I      intronic
chr1:155195188(-) A-I      intronic
chr1:155195331(-) A-I      intronic
chr1:155195735(-) A-I      intronic
chr1:155193986(-) A-I      intronic
chr1:155192874(-) A-I      intronic
chr1:155193982(-) A-I      intronic
chr1:155193981(-) A-I      intronic
chr1:155193924(-) A-I      intronic
chr1:155193868(-) A-I      intronic
chr1:155193862(-) A-I      intronic
chr1:155193815(-) A-I      intronic
chr1:155192891(-) A-I      intronic
chr1:155192873(-) A-I      intronic
chr1:155192872(-) A-I      intronic
chr1:155192856(-) A-I      intronic
chr1:155192832(-) A-I      intronic
chr1:155191984(-) A-I      intronic
chr1:155191961(-) A-I      intronic
chr1:155191956(-) A-I      intronic
chr1:155191458(-) A-I      intronic
chr1:155191442(-) A-I      intronic
chr1:155191396(-) A-I      intronic
chr1:155191087(-) A-I      intronic
chr1:155191033(-) A-I      intronic
chr1:155190981(-) A-I      intronic
chr1:155190455(-) A-I      intronic
chr1:155190432(-) A-I      intronic
chr1:155190402(-) A-I      intronic
chr1:155190399(-) A-I      intronic
chr1:155190397(-) A-I      intronic
chr1:155193991(-) A-I      intronic
chr1:155194432(-) A-I      intronic
chr1:155190301(-) A-I      intronic
chr1:155191365(-) A-I      intronic
chr1:155191252(-) A-I      intronic
chr1:155193471(-) A-I      intronic
chr1:155193497(-) A-I      intronic
chr1:155193911(-) A-I      intronic
chr1:155190367(-) A-I      intronic
chr1:155191159(-) A-I      intronic
chr1:155190479(-) A-I      intronic
chr1:155193916(-) A-I      intronic
chr1:155193917(-) A-I      intronic
chr1:155193925(-) A-I      intronic
chr1:155193914(-) A-I      intronic
chr1:155190877(-) A-I      intronic
chr1:155194025(-) A-I      intronic
chr1:155194289(-) A-I      intronic
chr1:155194320(-) A-I      intronic
chr1:155190927(-) A-I      intronic
chr1:155191850(-) A-I      intronic
chr1:155194410(-) A-I      intronic
chr1:155194469(-) A-I      intronic
chr1:155196068(-) A-I      intronic
chr1:155192020(-) A-I      intronic
chr1:155192038(-) A-I      intronic
chr1:155190933(-) A-I      intronic
chr1:155192514(-) A-I      intronic
chr1:155190953(-) A-I      intronic
chr1:155191502(-) A-I      intronic
chr1:155192807(-) A-I      intronic
chr1:155192808(-) A-I      intronic
chr1:155191361(-) A-I      intronic
chr1:155190360(-) A-I      intronic
chr1:155192834(-) A-I      intronic
chr1:155191926(-) A-I      intronic
chr1:155190340(-) A-I      intronic
chr1:155191348(-) A-I      intronic
chr1:155191920(-) A-I      intronic
chr1:155191405(-) A-I      intronic
chr1:155191397(-) A-I      intronic
chr1:155195843(-) A-I      intronic
chr1:155192706(-) A-I      intronic
chr1:155193923(-) A-I      intronic
chr1:155192543(-) A-I      intronic
chr1:155192515(-) A-I      intronic
chr1:155193863(-) A-I      intronic
chr1:155191357(-) A-I      intronic
chr1:155191296(-) A-I      intronic
chr1:155193871(-) A-I      intronic
chr1:155191383(-) A-I      intronic
chr1:155191499(-) A-I      intronic
chr1:155193987(-) A-I      intronic
chr1:155191271(-) A-I      intronic
chr1:155190431(-) A-I      intronic
chr1:155192696(-) A-I      intronic
chr1:155191393(-) A-I      intronic
chr1:155195989(-) A-I      intronic
chr1:155193517(-) A-I      intronic
chr1:155191280(-) A-I      intronic
chr1:155195816(-) A-I      intronic
chr1:155193516(-) A-I      intronic
chr1:155192844(-) A-I      intronic
chr1:155192767(-) A-I      intronic
chr1:155192840(-) A-I      intronic
chr1:155192542(-) A-I      intronic
chr1:155192525(-) A-I      intronic
chr1:155191410(-) A-I      intronic
chr1:155195984(-) A-I      intronic
chr1:155191459(-) A-I      intronic
chr1:155191491(-) A-I      intronic
chr1:155191025(-) A-I      intronic
chr1:155193511(-) A-I      intronic
chr1:155193610(-) A-I      intronic
chr1:155193839(-) A-I      intronic
chr1:155195826(-) A-I      intronic
chr1:155192947(-) A-I      intronic
chr1:155193581(-) A-I      intronic
chr1:155190393(-) A-I      intronic
chr1:155191422(-) A-I      intronic
chr1:155191024(-) A-I      intronic
chr1:155190314(-) A-I      intronic
chr1:155194288(-) A-I      intronic
chr1:155193844(-) A-I      intronic
chr1:155191381(-) A-I      intronic
chr1:155195522(-) A-I      intronic
chr1:155192697(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED GBAP1
chr1:155193844(-) A-I intron -    22327324

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase GBAP1
chr1:155183849-155183850(-) Y exon       26075521
chr1:155184108-155184109(-) m6A exon       25456834//27773535
chr1:155184876-155184877(-) m6A exon       27773535
chr1:155184901-155184902(-) m6A exon       27773535
chr1:155184915-155184916(-) m6A exon       27773535
chr1:155184925-155184926(-) m6A exon       27773535
chr1:155184951-155184952(-) m6A exon       27773535
chr1:155184999-155185000(-) m6A exon//intron       27773535
chr1:155187091-155187092(-) m6A exon       27773535
chr1:155187194-155187195(-) m6A exon//intron       27773535
chr1:155187781-155187782(-) m6A exon       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate GBAP1
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-9
Interactor2: GBAP1

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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