Detail Information

Basic Information:


  VIRBase ID:  

VHID00069086

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-9 UPRT
miRBase
Accession/Entrez ID		 zikv-mir-9 139596
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - FUR1//UPP

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR UPRT
chrX:74522424(+) A-I      intronic
chrX:74522485(+) A-I      intronic
chrX:74522343(+) A-I      intronic
chrX:74522474(+) A-I      intronic
chrX:74522481(+) A-I      intronic
chrX:74522490(+) A-I      intronic
chrX:74522435(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase UPRT
chrX:74493936-74493937(+) m6A 5'UTR//exon       24981863
chrX:74493962-74493963(+) m6A 5'UTR//exon       24981863
chrX:74494114-74494115(+) m6A CDS//exon       24284625//24209618//22608085
chrX:74494144-74494145(+) m6A CDS//exon       24284625//24209618//22608085
chrX:74494198-74494199(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22608085
chrX:74494213-74494214(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22608085
chrX:74494282-74494283(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22608085
chrX:74494384-74494385(+) m6A CDS//exon       24284625//25456834//24981863//22608085
chrX:74494391-74494392(+) m6A CDS//exon       24284625//25456834//24981863//22608085
chrX:74494401-74494402(+) Cm CDS//exon       -
chrX:74519582-74519583(+) m6A 3'UTR//CDS//exon       24981863
chrX:74519596-74519597(+) m6A 3'UTR//CDS//exon       24981863
chrX:74519689-74519690(+) m6A 3'UTR//CDS//exon       24209618
chrX:74523321-74523322(+) m6A 3'UTR//CDS//exon       24981863
chrX:74523935-74523936(+) m6A 3'UTR       -
chrX:74524009-74524010(+) m6A 3'UTR       -
chrX:74524035-74524036(+) m6A 3'UTR       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate UPRT
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleus K562 cells     -
Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-9
Interactor2: UPRT

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

Starting a new search, please wait ...