Detail Information

Basic Information:


  VIRBase ID:  

VHID00068894

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-9 DPH6
miRBase
Accession/Entrez ID		 zikv-mir-9 89978
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - ATPBD4

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR DPH6
chr15:35693727(-) A-I      intronic
chr15:35727169(-) A-I      intronic
chr15:35823771(-) A-I      intronic
chr15:35727152(-) A-I      intronic
chr15:35727157(-) A-I      intronic
chr15:35693769(-) A-I      intronic
chr15:35693748(-) A-I      intronic
chr15:35693767(-) A-I      intronic
chr15:35693739(-) A-I      intronic
chr15:35825060(-) A-I      intronic
chr15:35727176(-) A-I      intronic
chr15:35727193(-) A-I      intronic
chr15:35727194(-) A-I      intronic
chr15:35728503(-) A-I      intronic
chr15:35730470(-) A-I      intronic
chr15:35825102(-) A-I      intronic
chr15:35825186(-) A-I      intronic
chr15:35823706(-) A-I      intronic
chr15:35823785(-) A-I      intronic
chr15:35825269(-) A-I      intronic
chr15:35674528(-) A-I      intronic
chr15:35756383(-) A-I      intronic
chr15:35823812(-) A-I      intronic
chr15:35823839(-) A-I      intronic
chr15:35823878(-) A-I      intronic
chr15:35823929(-) A-I      intronic
chr15:35823942(-) A-I      intronic
chr15:35825062(-) A-I      intronic
chr15:35825045(-) A-I      intronic
chr15:35825070(-) A-I      intronic
chr15:35727027(-) A-I      intronic
chr15:35825061(-) A-I      intronic
chr15:35825160(-) A-I      intronic
chr15:35674525(-) A-I      intronic
chr15:35825142(-) A-I      intronic
chr15:35823772(-) A-I      intronic
chr15:35823813(-) A-I      intronic
chr15:35756373(-) A-I      intronic
chr15:35674513(-) A-I      intronic
chr15:35823760(-) A-I      intronic
chr15:35793215(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase DPH6
chr15:35664073-35664074(-) m6A 3'UTR//intron       27773535
chr15:35664098-35664099(-) Y 3'UTR//intron       26075521
chr15:35834696-35834697(-) m6A CDS//exon//intron       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate DPH6
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-9
Interactor2: DPH6

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

Starting a new search, please wait ...