Detail Information

Basic Information:


  VIRBase ID:  

VHID00068609

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-9 NOC3L
miRBase
Accession/Entrez ID		 zikv-mir-9 64318
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - AD24//C10orf117//FAD24

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR NOC3L
chr10:96109076(-) A-I      Syn:Gln->Gln
chr10:96113054(-) A-I      intronic
chr10:96091793(-) A-I      intronic
chr10:96093142(-) A-I      3'UTR
chr10:96091689(-) A-I      intronic
chr10:96089298(-) A-I      intronic
chr10:96082065(-) A-I      intronic
chr10:96090347(-) A-I      intronic
chr10:96096274(-) A-I      intronic
chr10:96096278(-) A-I      intronic
chr10:96112322(-) A-I      intronic
chr10:96089453(-) A-I      intronic
chr10:96091642(-) A-I      intronic
chr10:96091790(-) A-I      intronic
chr10:96090278(-) A-I      intronic
chr10:96096324(-) A-I      intronic
chr10:96091757(-) A-I      intronic
chr10:96090396(-) A-I      intronic
chr10:96090261(-) A-I      intronic
chr10:96112467(-) A-I      intronic
chr10:96091667(-) A-I      intronic
chr10:96096609(-) A-I      intronic
chr10:96090363(-) A-I      intronic
chr10:96090386(-) A-I      intronic
chr10:96091731(-) A-I      intronic
chr10:96091863(-) A-I      intronic
chr10:96091844(-) A-I      intronic
chr10:96091822(-) A-I      intronic
chr10:96090232(-) A-I      intronic
chr10:96091696(-) A-I      intronic
chr10:96090227(-) A-I      intronic
chr10:96091809(-) A-I      intronic
chr10:96091734(-) A-I      intronic
chr10:96090202(-) A-I      intronic
chr10:96090194(-) A-I      intronic
chr10:96089466(-) A-I      intronic
chr10:96078758(-) A-I      intronic
chr10:96089435(-) A-I      intronic
chr10:96091890(-) A-I      intronic
chr10:96089369(-) A-I      intronic
chr10:96090279(-) A-I      intronic
chr10:96110375(-) A-I      intronic
chr10:96091898(-) A-I      intronic
chr10:96089413(-) A-I      intronic
chr10:96090207(-) A-I      intronic
chr10:96089452(-) A-I      intronic
chr10:96091921(-) A-I      intronic
chr10:96090335(-) A-I      intronic
chr10:96089355(-) A-I      intronic
chr10:96089297(-) A-I      intronic
chr10:96090174(-) A-I      intronic
chr10:96090270(-) A-I      intronic
chr10:96096202(-) A-I      intronic
chr10:96090405(-) A-I      intronic
chr10:96091882(-) A-I      intronic
chr10:96091666(-) A-I      intronic
chr10:96096660(-) A-I      intronic
chr10:96091827(-) A-I      intronic
chr10:96096605(-) A-I      intronic
chr10:96090215(-) A-I      intronic
chr10:96091803(-) A-I      intronic
chr10:96090180(-) A-I      intronic
chr10:96089296(-) A-I      intronic
chr10:96110273(-) A-I      intronic
chr10:96090416(-) A-I      intronic
chr10:96090367(-) A-I      intronic
chr10:96091893(-) A-I      intronic
chr10:96110393(-) A-I      intronic
chr10:96091796(-) A-I      intronic
chr10:96089343(-) A-I      intronic
chr10:96091625(-) A-I      intronic
chr10:96091899(-) A-I      intronic
chr10:96120659(-) A-I      intronic
chr10:96090337(-) A-I      intronic
chr10:96091761(-) A-I      intronic
chr10:96091701(-) A-I      intronic
chr10:96091767(-) A-I      intronic
chr10:96089284(-) A-I      intronic
chr10:96091821(-) A-I      intronic
chr10:96091725(-) A-I      intronic
chr10:96090403(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NOC3L
chr10:96093560-96093561(-) m6A 3'UTR       24981863//26404942//22608085
chr10:96093571-96093572(-) m6A 3'UTR       24981863//26404942//22608085
chr10:96093635-96093636(-) m6A 3'UTR       22608085
chr10:96104612-96104613(-) m6A CDS       24981863//27773535
chr10:96104618-96104619(-) m6A CDS       24981863//27773535
chr10:96104669-96104670(-) m6A CDS       24981863//27773535
chr10:96106241-96106242(-) m6A CDS//exon       24981863//27773535
chr10:96106251-96106252(-) m6A CDS//exon       24981863//27773535
chr10:96106263-96106264(-) Am CDS//exon       -
chr10:96114809-96114810(-) m6A CDS//exon       24981863//27773535//22575960//22608085
chr10:96116301-96116302(-) m6A CDS//exon       24981863//27773535//22608085
chr10:96116945-96116946(-) m6A CDS//exon       24981863//27773535//22608085
chr10:96116994-96116995(-) m6A CDS//exon       24981863//27773535//22608085
chr10:96117011-96117012(-) m6A CDS//exon       24981863//27773535//22608085
chr10:96117020-96117021(-) m6A CDS//exon       24981863//27773535//22608085
chr10:96117117-96117118(-) m6A exon//intron       27773535
chr10:96117877-96117878(-) m6A CDS//exon       24981863//27773535
chr10:96121152-96121153(-) m6A exon//intron       24981863//27773535
chr10:96121156-96121157(-) m6A exon//intron       24981863//27773535//27773536
chr10:96121280-96121281(-) m6A exon//intron       24981863//22608085
chr10:96121441-96121442(-) m6A CDS//exon       24284625//24981863//22608085
chr10:96121458-96121459(-) m6A CDS//exon       24284625//24981863//22608085
chr10:96121494-96121495(-) m6A CDS//exon       24284625//24981863//22608085
chr10:96121503-96121504(-) m6A CDS//exon       24284625//24981863//27773535//22608085
chr10:96121536-96121537(-) m6A CDS//exon       24284625//24981863//27773535//22608085
chr10:96121561-96121562(-) m6A CDS//exon       24284625//24981863//22608085
chr10:96121569-96121570(-) m6A CDS//exon       24284625//24981863//22608085
chr10:96121583-96121584(-) m6A CDS//exon       24284625//24981863//22608085
chr10:96121614-96121615(-) m6A CDS//exon       24284625//24981863//27773535//22608085
chr10:96122628-96122629(-) m6A 5'UTR//exon       24981863
chr10:96122683-96122684(-) m6A 5'UTR//exon       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate NOC3L
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)     -
Membrane HCC cell line (HepG2)     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-9
Interactor2: NOC3L

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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