Detail Information

Basic Information:


  VIRBase ID:  

VHID00067244

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-9 RGS13
miRBase
Accession/Entrez ID		 zikv-mir-9 6003
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR RGS13
chr1:192612943(+) A-I      intronic
chr1:192612059(+) A-I      intronic
chr1:192612824(+) A-I      intronic
chr1:192612822(+) A-I      intronic
chr1:192613024(+) A-I      intronic
chr1:192612021(+) A-I      intronic
chr1:192612870(+) A-I      intronic
chr1:192612879(+) A-I      intronic
chr1:192612808(+) A-I      intronic
chr1:192612205(+) A-I      intronic
chr1:192612155(+) A-I      intronic
chr1:192612174(+) A-I      intronic
chr1:192612067(+) A-I      intronic
chr1:192612884(+) A-I      intronic
chr1:192612119(+) A-I      intronic
chr1:192612226(+) A-I      intronic
chr1:192611508(+) A-I      intronic
chr1:192612069(+) A-I      intronic
chr1:192612129(+) A-I      intronic
chr1:192612847(+) A-I      intronic
chr1:192612143(+) A-I      intronic
chr1:192612009(+) A-I      intronic
chr1:192612090(+) A-I      intronic
chr1:192612230(+) A-I      intronic
chr1:192613001(+) A-I      intronic
chr1:192612115(+) A-I      intronic
chr1:192612842(+) A-I      intronic
chr1:192612261(+) A-I      intronic
chr1:192612244(+) A-I      intronic
chr1:192612200(+) A-I      intronic
chr1:192612833(+) A-I      intronic
chr1:192612151(+) A-I      intronic
chr1:192613002(+) A-I      intronic
chr1:192612089(+) A-I      intronic
chr1:192612266(+) A-I      intronic
chr1:192612939(+) A-I      intronic
chr1:192612935(+) A-I      intronic
chr1:192612268(+) A-I      intronic
chr1:192612931(+) A-I      intronic
chr1:192612885(+) A-I      intronic
chr1:192612252(+) A-I      intronic
chr1:192612930(+) A-I      intronic
chr1:192612148(+) A-I      intronic
chr1:192612921(+) A-I      intronic
chr1:192612932(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED RGS13
chr1:192612090(+) A-I intron -    22327324
chr1:192612155(+) A-I intron -    22327324
chr1:192612009(+) A-G intron -    22484847
chr1:192612021(+) A-G intron -    22484847
chr1:192612067(+) A-G intron -    22484847
chr1:192612090(+) A-G intron -    22484847
chr1:192612091(+) G-A intron -    22484847
chr1:192612129(+) A-G intron -    22484847
chr1:192612148(+) A-G intron -    22484847
chr1:192612151(+) A-G intron -    22484847
chr1:192612155(+) A-G intron -    22484847
chr1:192612174(+) A-G intron -    22484847
chr1:192612205(+) A-G intron -    22484847
chr1:192612226(+) A-G intron -    22484847
chr1:192612252(+) A-G intron -    22484847
chr1:192612266(+) A-G intron -    22484847
chr1:192612847(+) A-G intron -    22484847
chr1:192612870(+) A-G intron -    22484847
chr1:192612884(+) A-G intron -    22484847
chr1:192612885(+) A-G intron -    22484847
chr1:192612939(+) A-G intron -    22484847
chr1:192613002(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase RGS13
chr1:192615871-192615872(+) m6A exon//intron       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate RGS13
Exosome Blood     -
Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-9
Interactor2: RGS13

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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