Detail Information

Basic Information:


  VIRBase ID:  

VHID00066559

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-8 FPGT-TNNI3K
miRBase
Accession/Entrez ID		 zikv-mir-8 100526835
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - CARK//TNNI3K

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR FPGT-TNNI3K
chr1:74669647(+) A-I      intronic
chr1:74667779(+) A-I      intronic
chr1:74669632(+) A-I      intronic
chr1:74669180(+) A-I      intronic
chr1:74669476(+) A-I      intronic
chr1:74669346(+) A-I      intronic
chr1:74669242(+) A-I      intronic
chr1:74669215(+) A-I      intronic
chr1:74669205(+) A-I      intronic
chr1:74669123(+) A-I      intronic
chr1:74669714(+) A-I      intronic
chr1:74669615(+) A-I      intronic
chr1:74669606(+) A-I      intronic
chr1:74669611(+) A-I      intronic
chr1:74669605(+) A-I      intronic
chr1:74669595(+) A-I      intronic
chr1:74669579(+) A-I      intronic
chr1:74669570(+) A-I      intronic
chr1:74669550(+) A-I      intronic
chr1:74669539(+) A-I      intronic
chr1:74669487(+) A-I      intronic
chr1:74669728(+) A-I      intronic
chr1:74669349(+) A-I      intronic
chr1:74669540(+) A-I      intronic
chr1:74669676(+) A-I      intronic
chr1:74669156(+) A-I      intronic
chr1:74669337(+) A-I      intronic
chr1:74669470(+) A-I      intronic
chr1:74669628(+) A-I      intronic
chr1:74669675(+) A-I      intronic
chr1:74669573(+) A-I      intronic
chr1:74669471(+) A-I      intronic
chr1:74669671(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase FPGT-TNNI3K
chr1:74663978-74663979(+) m6A CDS//exon       24981863//22608085
chr1:74665351-74665352(+) m6A CDS//exon       24981863
chr1:74665377-74665378(+) m6A CDS//exon       24981863
chr1:74670171-74670172(+) m6A intron       22608085
chr1:74670243-74670244(+) m6A intron       22608085
chr1:74670285-74670286(+) m6A intron       22608085
chr1:74670375-74670376(+) m6A intron       22608085
chr1:74670383-74670384(+) m6A intron       22608085
chr1:74670462-74670463(+) m6A intron       24981863//22608085
chr1:74670485-74670486(+) m6A intron       24981863//22608085
chr1:74670521-74670522(+) m6A intron       24981863//22608085
chr1:74670657-74670658(+) m6A intron       24284625//24209618//24981863//22608085
chr1:74670686-74670687(+) m6A intron       24284625//24209618//24981863//22608085
chr1:74670760-74670761(+) m6A intron       24209618//22608085
chr1:74670811-74670812(+) m6A intron       22608085
chr1:74670925-74670926(+) m6A intron       22608085
chr1:74671177-74671178(+) m6A intron       22608085
chr1:74671263-74671264(+) m6A intron       24981863//22608085
chr1:74671282-74671283(+) m6A intron       24981863//22608085
chr1:74671300-74671301(+) m6A intron       24981863//22608085
chr1:74671379-74671380(+) m6A intron       24981863//22608085
chr1:74699590-74699591(+) m6A intron       -
chr1:74699595-74699596(+) m6A intron       -
chr1:74699601-74699602(+) m6A intron       -
chr1:74699610-74699611(+) m6A intron       -
chr1:74699656-74699657(+) m6A intron       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate FPGT-TNNI3K
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-8
Interactor2: FPGT-TNNI3K

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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