Detail Information

Basic Information:


  VIRBase ID:  

VHID00066536

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-8 BORCS8
miRBase
Accession/Entrez ID		 zikv-mir-8 729991
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - MEF2BNB

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR BORCS8
chr19:19288195(-) A-I      3'UTR
chr19:19288160(-) A-I      3'UTR
chr19:19288182(-) A-I      3'UTR
chr19:19288234(-) A-I      3'UTR
chr19:19288194(-) A-I      3'UTR
chr19:19288257(-) A-I      3'UTR
chr19:19288232(-) A-I      3'UTR
chr19:19288233(-) A-I      3'UTR
chr19:19288204(-) A-I      3'UTR

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase BORCS8
chr19:19287740-19287741(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//22608085
chr19:19287807-19287808(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//22608085
chr19:19287815-19287816(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//22608085
chr19:19287844-19287845(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr19:19287919-19287920(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr19:19288089-19288090(-) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr19:19288117-19288118(-) m6A 3'UTR//exon//intron       24284625//24209618//24981863//27773535//27371828//22608085
chr19:19288231-19288232(-) m6A 3'UTR//CDS//exon//intron       24284625//24209618//27773535//27773536
chr19:19288318-19288319(-) m6A 3'UTR//exon//intron       24209618//27773536
chr19:19289278-19289279(-) m6A exon//intron       27773535
chr19:19289353-19289354(-) m6A exon//intron       27773535
chr19:19289387-19289388(-) m6A exon//intron       27773535
chr19:19291205-19291206(-) m6A 3'UTR//exon//intron       27773535
chr19:19291524-19291525(-) m6A 3'UTR//CDS//exon       24284625//24209618//27773535//27773536
chr19:19291560-19291561(-) m6A CDS//exon       24284625//24209618//27773535//27773536
chr19:19292702-19292703(-) m6A 3'UTR//intron       24284625//27773535//27773536
chr19:19292769-19292770(-) m6A 3'UTR//intron       24284625//25456834//27773535//27371828//27773536//22608085
chr19:19292808-19292809(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//27371828//27773536//22608085
chr19:19292839-19292840(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//27371828//27773536//22608085
chr19:19293015-19293016(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//27371828//22608085
chr19:19293059-19293060(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//27371828//22608085
chr19:19293088-19293089(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//27371828//22608085
chr19:19293097-19293098(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//27371828//22608085
chr19:19293116-19293117(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr19:19293136-19293137(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr19:19293153-19293154(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr19:19293285-19293286(-) m6A 3'UTR//exon//intron       24284625//24981863//22608085
chr19:19293310-19293311(-) m6A 3'UTR//exon//intron       24284625//24981863//27773536//22608085
chr19:19293333-19293334(-) m6A 3'UTR//exon//intron       24284625//24981863//27773536//22608085
chr19:19293368-19293369(-) m6A 3'UTR//exon//intron       24284625//24981863//27773536
chr19:19293411-19293412(-) m6A 5'UTR//CDS//exon       24284625//24209618//27773535//27773536
chr19:19293431-19293432(-) m6A 5'UTR//CDS//exon       24284625//24209618//27773535//27773536
chr19:19293471-19293472(-) m6A 5'UTR//CDS//exon       24284625//27773535//27773536
chr19:19293480-19293481(-) m6A 5'UTR//CDS//exon       24284625//27773535//27773536
chr19:19296902-19296903(-) m6A CDS//exon//intron       24284625//27773536
chr19:19297807-19297808(-) m6A CDS//exon//intron       24284625

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate BORCS8
Chromatin K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-8
Interactor2: BORCS8

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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