Detail Information

Basic Information:


  VIRBase ID:  

VHID00064128

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-8 GMPS
miRBase
Accession/Entrez ID		 zikv-mir-8 8833
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - GATD7

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR GMPS
chr3:155635500(+) A-I      intronic
chr3:155635519(+) A-I      intronic
chr3:155600892(+) A-I      intronic
chr3:155635506(+) A-I      intronic
chr3:155635542(+) A-I      intronic
chr3:155635547(+) A-I      intronic
chr3:155606579(+) A-I      intronic
chr3:155635515(+) A-I      intronic
chr3:155635484(+) A-I      intronic
chr3:155600960(+) A-I      intronic
chr3:155606431(+) A-I      intronic
chr3:155599189(+) A-I      intronic
chr3:155599789(+) A-I      intronic
chr3:155599814(+) A-I      intronic
chr3:155603671(+) A-I      intronic
chr3:155648664(+) A-I      intronic
chr3:155604109(+) A-I      intronic
chr3:155631799(+) A-I      intronic
chr3:155604177(+) A-I      intronic
chr3:155604179(+) A-I      intronic
chr3:155604181(+) A-I      intronic
chr3:155635604(+) A-I      intronic
chr3:155604365(+) A-I      intronic
chr3:155606280(+) A-I      intronic
chr3:155635501(+) A-I      intronic
chr3:155650747(+) A-I      intronic
chr3:155646059(+) A-I      intronic
chr3:155635497(+) A-I      intronic
chr3:155631861(+) A-I      intronic
chr3:155631865(+) A-I      intronic
chr3:155635392(+) A-I      intronic
chr3:155635485(+) A-I      intronic
chr3:155604214(+) A-I      intronic
chr3:155599062(+) A-I      intronic
chr3:155599017(+) A-I      intronic
chr3:155599050(+) A-I      intronic
chr3:155599079(+) A-I      intronic
chr3:155599103(+) A-I      intronic
chr3:155599135(+) A-I      intronic
chr3:155599144(+) A-I      intronic
chr3:155648804(+) A-I      intronic
chr3:155599692(+) A-I      intronic
chr3:155617036(+) A-I      intronic
chr3:155616980(+) A-I      intronic
chr3:155644069(+) A-I      intronic
chr3:155599223(+) A-I      intronic
chr3:155617042(+) A-I      intronic
chr3:155599867(+) A-I      intronic
chr3:155616970(+) A-I      intronic
chr3:155616907(+) A-I      intronic
chr3:155617063(+) A-I      intronic
chr3:155643991(+) A-I      intronic
chr3:155601919(+) A-I      intronic
chr3:155616885(+) A-I      intronic
chr3:155616967(+) A-I      intronic
chr3:155603810(+) A-I      intronic
chr3:155617076(+) A-I      intronic
chr3:155599039(+) A-I      intronic
chr3:155617145(+) A-I      intronic
chr3:155644682(+) A-I      intronic
chr3:155643940(+) A-I      intronic
chr3:155616971(+) A-I      intronic
chr3:155617028(+) A-I      intronic
chr3:155635541(+) A-I      intronic
chr3:155616996(+) A-I      intronic
chr3:155599023(+) A-I      intronic
chr3:155616997(+) A-I      intronic
chr3:155616902(+) A-I      intronic
chr3:155616893(+) A-I      intronic
chr3:155617002(+) A-I      intronic
chr3:155599091(+) A-I      intronic
chr3:155634787(+) A-I      intronic
chr3:155617077(+) A-I      intronic
chr3:155617010(+) A-I      intronic
chr3:155617037(+) A-I      intronic
chr3:155603775(+) A-I      intronic
chr3:155603749(+) A-I      intronic
chr3:155617146(+) A-I      intronic
chr3:155604569(+) A-I      intronic
chr3:155591190(+) A-I      intronic
chr3:155650748(+) A-I      intronic
chr3:155599673(+) A-I      intronic
chr3:155599712(+) A-I      intronic
chr3:155604217(+) A-I      intronic
chr3:155599593(+) A-I      intronic
chr3:155602054(+) A-I      intronic
chr3:155603776(+) A-I      intronic
chr3:155599041(+) A-I      intronic
chr3:155604103(+) A-I      intronic
chr3:155600930(+) A-I      intronic
chr3:155604343(+) A-I      intronic
chr3:155616764(+) A-I      intronic
chr3:155604096(+) A-I      intronic
chr3:155629543(+) A-I      intronic
chr3:155599694(+) A-I      intronic
chr3:155603739(+) A-I      intronic
chr3:155644674(+) A-I      intronic
chr3:155604244(+) A-I      intronic
chr3:155635486(+) A-I      intronic
chr3:155599635(+) A-I      intronic
chr3:155603653(+) A-I      intronic
chr3:155625341(+) A-I      intronic
chr3:155599668(+) A-I      intronic
chr3:155604213(+) A-I      intronic
chr3:155613239(+) A-I      ncRNA
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED GMPS
chr3:155599673(+) A-I intron -    22327324
chr3:155616885(+) A-I intron -    22028664
chr3:155616893(+) A-I intron -    22028664
chr3:155616902(+) A-I intron -    22028664
chr3:155616907(+) A-I intron -    22028664
chr3:155616967(+) A-I intron -    22028664
chr3:155616970(+) A-I intron -    22028664
chr3:155616971(+) A-I intron -    22028664
chr3:155616980(+) A-I intron -    22028664
chr3:155616996(+) A-I intron -    22028664
chr3:155616997(+) A-I intron -    22028664
chr3:155617002(+) A-I intron -    22028664
chr3:155617010(+) A-I intron -    22028664
chr3:155617028(+) A-I intron -    22028664
chr3:155617036(+) A-I intron -    22028664
chr3:155617037(+) A-I intron -    22028664
chr3:155617042(+) A-I intron -    22028664
chr3:155617063(+) A-I intron -    22028664
chr3:155617076(+) A-I intron -    22028664
chr3:155617077(+) A-I intron -    22028664
chr3:155617145(+) A-I intron -    22028664
chr3:155617146(+) A-I intron -    22028664
chr3:155593208(+) T-C intron -    22484847
chr3:155597076(+) C-T intron -    22484847
chr3:155599039(+) A-G intron -    22484847
chr3:155599041(+) A-G intron -    22484847
chr3:155599088(+) A-G intron -    22484847
chr3:155599091(+) A-G intron -    22484847
chr3:155599668(+) A-G intron -    22484847
chr3:155599693(+) A-G intron -    22484847
chr3:155599694(+) A-G intron -    22484847
chr3:155599695(+) A-G intron -    22484847
chr3:155599777(+) A-G intron -    22484847
chr3:155599798(+) A-G intron -    22484847
chr3:155600930(+) A-G intron -    22484847
chr3:155600961(+) A-G intron -    22484847
chr3:155603653(+) A-G intron -    22484847
chr3:155603684(+) A-G intron -    22484847
chr3:155603776(+) A-G intron -    22484847
chr3:155603810(+) A-G intron -    22484847
chr3:155604096(+) A-G intron -    22484847
chr3:155604103(+) A-G intron -    22484847
chr3:155604213(+) A-G intron -    22484847
chr3:155604217(+) A-G intron -    22484847
chr3:155604243(+) A-G intron -    22484847
chr3:155604244(+) A-G intron -    22484847
chr3:155606662(+) C-G intron -    22484847
chr3:155612136(+) T-C intron -    22484847
chr3:155616785(+) C-T intron -    22484847
chr3:155634787(+) A-G intron -    22484847
chr3:155635486(+) A-G intron -    22484847
chr3:155635539(+) A-G intron -    22484847
chr3:155635583(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase GMPS
chr3:155588678-155588679(+) m6A CDS       -
chr3:155611325-155611326(+) m6A CDS//intron       -
chr3:155623974-155623975(+) Y CDS//exon       25219674
chr3:155623998-155623999(+) m6A CDS//exon       22575960
chr3:155624040-155624041(+) m6A CDS//exon       26404942//22575960
chr3:155628599-155628600(+) m6A CDS       26404942
chr3:155628615-155628616(+) m6A CDS       26404942
chr3:155628638-155628639(+) Gm CDS       -
chr3:155632239-155632240(+) m6A CDS       24981863//27773535
chr3:155632272-155632273(+) m6A CDS       24981863//27773535
chr3:155633835-155633836(+) m6A CDS       24981863
chr3:155633842-155633843(+) m6A CDS       24981863
chr3:155633926-155633927(+) m6A CDS       26404942
chr3:155633936-155633937(+) m6A CDS       26404942
chr3:155655463-155655464(+) m6A CDS       24284625//24981863//27773535//22575960//22608085
chr3:155655484-155655485(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr3:155655652-155655653(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr3:155655703-155655704(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085
chr3:155655841-155655842(+) m6A 3'UTR       24981863//22608085
chr3:155655954-155655955(+) m6A 3'UTR       24981863//22608085
chr3:155656002-155656003(+) m6A 3'UTR       24981863//22608085
chr3:155661584-155661585(+) m6A 3'UTR       22608085
chr3:155661606-155661607(+) m6A 3'UTR       22608085
chr3:155661710-155661711(+) m6A 3'UTR       22608085
chr3:155661719-155661720(+) m6A 3'UTR       22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate GMPS
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)     -
Membrane HCC cell line (HepG2)|K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HeLa-S3 cells|K562 cells     -
Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-8
Interactor2: GMPS

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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