Detail Information

Basic Information:


  VIRBase ID:  

VHID00063450

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-8 ID2
miRBase
Accession/Entrez ID		 zikv-mir-8 3398
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - bHLHb26//GIG8//ID2A//ID2H

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ID2
chr2:8823570(+) A-I      intronic
chr2:8823643(+) A-I      intronic
chr2:8823637(+) A-I      intronic
chr2:8823631(+) A-I      intronic
chr2:8823591(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ID2
chr2:8822332-8822333(+) m6A CDS       24981863
chr2:8822344-8822345(+) m6A CDS       24981863
chr2:8822373-8822374(+) m6A CDS       -
chr2:8822461-8822462(+) m6A CDS       -
chr2:8823067-8823068(+) m6A 3'UTR//intron       27773535//22608085
chr2:8823885-8823886(+) m6A 3'UTR//exon       24981863//27773535//22608085
chr2:8823914-8823915(+) m6A 3'UTR//exon       24981863//27773535//22608085
chr2:8823927-8823928(+) m6A 3'UTR//exon       24981863//27773535//22608085
chr2:8823961-8823962(+) m6A 3'UTR//exon       24981863//27773535//22608085
chr2:8824001-8824002(+) m6A 3'UTR//exon       24981863//27773535//22608085
chr2:8824029-8824030(+) m6A 3'UTR//exon       24981863//27773535//22608085
chr2:8824133-8824134(+) m6A 3'UTR//exon       24981863//27773535//22608085
chr2:8824286-8824287(+) m6A 3'UTR       27773535
chr2:8824295-8824296(+) m6A 3'UTR       27773535
chr2:8824380-8824381(+) m6A 3'UTR       27773535
chr2:8824405-8824406(+) m6A 3'UTR       27773535
chr2:8824475-8824476(+) m6A 3'UTR       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ID2
Chromatin K562 cells     -
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleus HeLa-S3 cells     -
Ribosome HEK-293 cells     22199352
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-8
Interactor2: ID2

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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