Detail Information

Basic Information:


  VIRBase ID:  

VHID00062697

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-7 MTHFD2L
miRBase
Accession/Entrez ID		 zikv-mir-7 441024
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR MTHFD2L
chr4:75104202(+) A-I      intronic
chr4:75037400(+) A-I      intronic
chr4:75037399(+) A-I      intronic
chr4:75104200(+) A-I      intronic
chr4:75107264(+) A-I      intronic
chr4:75104181(+) A-I      intronic
chr4:75158837(+) A-I      intronic
chr4:75104194(+) A-I      intronic
chr4:75029651(+) A-I      intronic
chr4:75098508(+) A-I      intronic
chr4:75037338(+) A-I      intronic
chr4:75104195(+) A-I      intronic
chr4:75104171(+) A-I      intronic
chr4:75107147(+) A-I      intronic
chr4:75029867(+) A-I      intronic
chr4:75037373(+) A-I      intronic
chr4:75096295(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED MTHFD2L
chr4:75107147(+) A-G intron -    22484847
chr4:75107211(+) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase MTHFD2L
chr4:75048488-75048489(+) m6A 3'UTR//intron       22608085
chr4:75048499-75048500(+) m6A 3'UTR//intron       22608085
chr4:75048510-75048511(+) m6A 3'UTR//intron       22608085
chr4:75048577-75048578(+) m6A 3'UTR//intron       22608085
chr4:75048635-75048636(+) m6A 3'UTR//intron       22608085
chr4:75048869-75048870(+) m6A 3'UTR//intron       22608085
chr4:75048896-75048897(+) m6A 3'UTR//intron       22608085
chr4:75048913-75048914(+) m6A 3'UTR//intron       22608085
chr4:75048921-75048922(+) m6A 3'UTR//intron       22608085
chr4:75049272-75049273(+) m6A 3'UTR//intron       25456834
chr4:75049289-75049290(+) m6A 3'UTR//intron       25456834
chr4:75049333-75049334(+) m6A 3'UTR//intron       25456834
chr4:75049358-75049359(+) m6A 3'UTR//intron       25456834

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate MTHFD2L
Chromatin K562 cells     -
Cytosol K562 cells     -
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|K562 cells     -
Ribosome-free cytosol Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-7
Interactor2: MTHFD2L

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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