Detail Information

Basic Information:


  VIRBase ID:  

VHID00062058

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-7 SMTNL1
miRBase
Accession/Entrez ID		 zikv-mir-7 219537
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - CHASM

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR SMTNL1
chr11:57312907(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED SMTNL1
chr11:57315892(+) A-I intron -    22327324
chr11:57316653(+) A-I intron -    22327324
chr11:57312339(+) T-C intron -    22484847
chr11:57312375(+) T-C intron -    22484847
chr11:57315892(+) T-C intron -    22484847
chr11:57316031(+) T-C intron -    22484847
chr11:57316060(+) T-C intron -    22484847
chr11:57316061(+) T-C intron -    22484847
chr11:57316502(+) C-T intron -    22484847
chr11:57316591(+) T-C intron -    22484847
chr11:57316653(+) T-C intron -    22484847
chr11:57317099(+) T-C intron -    22484847
chr11:57317137(+) T-C intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SMTNL1
chr11:57310393-57310394(+) m6A CDS       27773535
chr11:57310424-57310425(+) m6A CDS       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate SMTNL1
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-7
Interactor2: SMTNL1

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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