Detail Information

Basic Information:


  VIRBase ID:  

VHID00061414

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-7 LRIG3
miRBase
Accession/Entrez ID		 zikv-mir-7 121227
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - LIG3

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR LRIG3
chr12:59306033(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase LRIG3
chr12:59266150-59266151(-) m6A 3'UTR       27773535//22608085
chr12:59266219-59266220(-) m6A 3'UTR       24981863//27773535//22608085
chr12:59266307-59266308(-) m6A 3'UTR       24284625//24981863//27773535//22575960//22608085
chr12:59266342-59266343(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22575960//22608085
chr12:59266352-59266353(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr12:59266360-59266361(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr12:59266388-59266389(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr12:59266396-59266397(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr12:59266406-59266407(-) m6A 3'UTR//CDS       24981863
chr12:59266410-59266411(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr12:59266448-59266449(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr12:59266480-59266481(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr12:59266486-59266487(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr12:59266542-59266543(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22575960//22608085
chr12:59266572-59266573(-) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085
chr12:59267360-59267361(-) m6A 3'UTR//intron       22608085
chr12:59267379-59267380(-) m6A 3'UTR//intron       22608085
chr12:59271450-59271451(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//22608085
chr12:59271526-59271527(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr12:59271531-59271532(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr12:59271536-59271537(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr12:59271580-59271581(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//27773536//22608085
chr12:59271598-59271599(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//27773536//22608085
chr12:59271603-59271604(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//27773536//22608085
chr12:59271631-59271632(-) m6A 3'UTR//CDS       24284625//24209618//24981863//27773535//27773536//22608085
chr12:59272649-59272650(-) m6A 3'UTR//CDS       24284625//27773535//22608085
chr12:59272679-59272680(-) m6A 3'UTR//CDS       27773535
chr12:59274422-59274423(-) Y CDS//exon       26075521
chr12:59274546-59274547(-) m6A CDS//exon       24981863//22608085
chr12:59274553-59274554(-) m6A CDS//exon       24981863//27371828//22608085
chr12:59274644-59274645(-) m6A CDS//exon       22608085
chr12:59284514-59284515(-) Y CDS       26075521
chr12:59313840-59313841(-) m6A CDS//exon       27773536
chr12:59313849-59313850(-) m6A CDS//exon       27773536
chr12:59313914-59313915(-) m6A CDS//exon       27371828//27773536
chr12:59313933-59313934(-) m6A CDS//exon       27371828//27773536
chr12:59314021-59314022(-) m6A 5'UTR       24209618//27773536
chr12:59314035-59314036(-) m6A 5'UTR       24209618//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate LRIG3
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-7
Interactor2: LRIG3

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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