Detail Information

Basic Information:


  VIRBase ID:  

VHID00060866

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-7 KIAA1109
miRBase
Accession/Entrez ID		 zikv-mir-7 84162
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - ALKKUCS//FSA//Tweek

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR KIAA1109
chr4:123203682(+) A-I      intronic
chr4:123076741(+) A-I      intronic
chr4:123075906(+) A-I      intronic
chr4:123076634(+) A-I      intronic
chr4:123080471(+) A-I      intronic
chr4:123080372(+) A-I      intronic
chr4:123213255(+) A-I      intronic
chr4:123213252(+) A-I      intronic
chr4:123204828(+) A-I      intronic
chr4:123225392(+) A-I      intronic
chr4:123259481(+) A-I      intronic
chr4:123091346(+) A-I      intronic
chr4:123076676(+) A-I      intronic
chr4:123076668(+) A-I      intronic
chr4:123204795(+) A-I      intronic
chr4:123079779(+) A-I      intronic
chr4:123204746(+) A-I      intronic
chr4:123091285(+) A-I      intronic
chr4:123080546(+) A-I      intronic
chr4:123203647(+) A-I      intronic
chr4:123111303(+) A-I      intronic
chr4:123199944(+) A-I      intronic
chr4:123080364(+) A-I      intronic
chr4:123080507(+) A-I      intronic
chr4:123076608(+) A-I      intronic
chr4:123080539(+) A-I      intronic
chr4:123091340(+) A-I      intronic
chr4:123076679(+) A-I      intronic
chr4:123091276(+) A-I      intronic
chr4:123090236(+) A-I      intronic
chr4:123079706(+) A-I      intronic
chr4:123204887(+) A-I      intronic
chr4:123204899(+) A-I      intronic
chr4:123198357(+) A-I      intronic
chr4:123080530(+) A-I      intronic
chr4:123080569(+) A-I      intronic
chr4:123079805(+) A-I      intronic
chr4:123091272(+) A-I      intronic
chr4:123199919(+) A-I      intronic
chr4:123225394(+) A-I      intronic
chr4:123076740(+) A-I      intronic
chr4:123198282(+) A-I      intronic
chr4:123091341(+) A-I      intronic
chr4:123203577(+) A-I      intronic
chr4:123198422(+) A-I      intronic
chr4:123204927(+) A-I      intronic
chr4:123198349(+) A-I      intronic
chr4:123082679(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED KIAA1109
chr4:123111303(+) A-G intron -    22484847
chr4:123198357(+) A-G intron -    22484847
chr4:123199916(+) A-G intron -    22484847
chr4:123199919(+) A-G intron -    22484847
chr4:123203647(+) A-G intron -    22484847
chr4:123203694(+) A-G intron -    22484847
chr4:123203698(+) G-A intron -    22484847
chr4:123204899(+) A-G intron -    22484847
chr4:123209836(+) A-C intron -    22484847
chr4:123209837(+) A-T intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase KIAA1109
chr4:123113400-123113401(+) m6A CDS       24981863
chr4:123151174-123151175(+) m6A CDS//exon       24284625//24981863//22608085
chr4:123151210-123151211(+) m6A CDS//exon       24284625//24981863//22608085
chr4:123151270-123151271(+) m6A CDS//exon       24284625//24981863//22608085
chr4:123151315-123151316(+) m6A CDS//exon       24284625//22608085
chr4:123151330-123151331(+) m6A CDS//exon       24284625//22608085
chr4:123160897-123160898(+) m6A CDS//exon       24284625//24981863//22608085
chr4:123160951-123160952(+) m6A CDS//exon       24284625//24981863//22608085
chr4:123161070-123161071(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085
chr4:123161103-123161104(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr4:123161165-123161166(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr4:123161193-123161194(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr4:123161208-123161209(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr4:123161267-123161268(+) m6A CDS       24284625//24209618//25456834//24981863//22608085
chr4:123161295-123161296(+) m6A CDS       24284625//24209618//24981863//22608085
chr4:123161309-123161310(+) m6A CDS       24284625//24209618//24981863//22608085
chr4:123161349-123161350(+) m6A CDS       24284625//24209618//24981863//22608085
chr4:123161409-123161410(+) m6A CDS       24284625//24209618//24981863//22608085
chr4:123176039-123176040(+) m6A CDS       24981863
chr4:123176050-123176051(+) m6A CDS       24981863
chr4:123188020-123188021(+) m6A CDS       24981863
chr4:123188039-123188040(+) m6A CDS       24981863
chr4:123188046-123188047(+) m6A CDS       24981863
chr4:123188076-123188077(+) m6A CDS       24284625//24981863
chr4:123192208-123192209(+) m6A CDS       24284625//24981863//22608085
chr4:123192227-123192228(+) m6A CDS       24284625//24981863//22608085
chr4:123192279-123192280(+) m6A CDS       24284625//24209618//24981863//22608085
chr4:123192446-123192447(+) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr4:123192451-123192452(+) Y CDS       26075521
chr4:123192457-123192458(+) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr4:123192506-123192507(+) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr4:123192514-123192515(+) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr4:123192522-123192523(+) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr4:123192597-123192598(+) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr4:123192605-123192606(+) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr4:123192639-123192640(+) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr4:123192671-123192672(+) m6A CDS       24284625//24209618//24981863//27773535//22608085
chr4:123192760-123192761(+) m6A CDS       24284625//24209618//24981863//22608085
chr4:123192863-123192864(+) m6A CDS       22608085
chr4:123192871-123192872(+) m6A CDS       22608085
chr4:123193363-123193364(+) m6A CDS       22608085
chr4:123193368-123193369(+) m6A CDS       22608085
chr4:123193388-123193389(+) m6A CDS       22608085
chr4:123202760-123202761(+) m6A CDS       24981863
chr4:123202772-123202773(+) m6A CDS       24981863
chr4:123236751-123236752(+) m6A CDS       -
chr4:123236784-123236785(+) m6A CDS       -
chr4:123237540-123237541(+) m6A CDS//intron       -
chr4:123237936-123237937(+) m6A CDS       24981863
chr4:123237981-123237982(+) m6A CDS       24981863
chr4:123237990-123237991(+) m6A CDS       24981863
chr4:123239323-123239324(+) m6A CDS       24981863
chr4:123239330-123239331(+) m6A CDS       24981863
chr4:123249280-123249281(+) m6A CDS//exon       -
chr4:123249363-123249364(+) m6A CDS//exon       -
chr4:123249399-123249400(+) m6A CDS//exon       -
chr4:123280828-123280829(+) m6A CDS       24981863//22608085
chr4:123280865-123280866(+) m6A CDS       24981863//22608085
chr4:123283198-123283199(+) m6A CDS       24981863//22608085
chr4:123283267-123283268(+) m6A CDS       24981863//22608085
chr4:123283313-123283314(+) m6A CDS       24981863//22608085
chr4:123283385-123283386(+) m6A CDS       22608085
chr4:123283395-123283396(+) m6A CDS       22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate KIAA1109
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)|K562 cells     -
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Insoluble cytoplasm HCC cell line (HepG2)|K562 cells     -
Membrane K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-7
Interactor2: KIAA1109

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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