Detail Information

Basic Information:


  VIRBase ID:  

VHID00058761

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-7 TFIP11
miRBase
Accession/Entrez ID		 zikv-mir-7 24144
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - bK445C9.6//NTR1//Spp382//STIP//STIP-1//TIP39

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR TFIP11
chr22:26900991(-) A-I      intronic
chr22:26901805(-) A-I      intronic
chr22:26890995(-) A-I      intronic
chr22:26891109(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED TFIP11
chr22:26891512(-) A-I intron -    22327324
chr22:26890997(-) T-C intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TFIP11
chr22:26887209-26887210(-) m6A 3'UTR       27773535
chr22:26887244-26887245(-) m6A 3'UTR       27773535
chr22:26887260-26887261(-) m6A 3'UTR       27773535
chr22:26887401-26887402(-) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085
chr22:26887455-26887456(-) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085
chr22:26887501-26887502(-) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085
chr22:26887509-26887510(-) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085
chr22:26887554-26887555(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr22:26887758-26887759(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr22:26887763-26887764(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr22:26887824-26887825(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr22:26887917-26887918(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr22:26887949-26887950(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr22:26887960-26887961(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr22:26887977-26887978(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr22:26888005-26888006(-) Gm CDS//exon       -
chr22:26888157-26888158(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr22:26888168-26888169(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr22:26888177-26888178(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr22:26888225-26888226(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085
chr22:26888267-26888268(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr22:26888303-26888304(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr22:26890127-26890128(-) m6A CDS//exon       24209618//27773535//22575960
chr22:26890157-26890158(-) m6A CDS//exon       24209618//27773535
chr22:26890187-26890188(-) m6A CDS//exon       24209618
chr22:26890342-26890343(-) m6A exon//intron       24284625//24209618//24981863//22608085
chr22:26890347-26890348(-) m6A exon//intron       24284625//24209618//24981863//22608085
chr22:26890359-26890360(-) m6A exon//intron       24284625//24209618//24981863//22608085
chr22:26890409-26890410(-) m6A exon//intron       24284625//24209618//24981863//22608085
chr22:26890495-26890496(-) m6A exon//intron       24284625//24209618//24981863//22608085
chr22:26892055-26892056(-) m6A CDS       24284625
chr22:26892256-26892257(-) m6A CDS       24284625//27773535
chr22:26892268-26892269(-) m6A CDS       27773535
chr22:26892274-26892275(-) m6A CDS       27773535
chr22:26895133-26895134(-) m6A CDS//exon       27773536
chr22:26895172-26895173(-) m6A CDS//exon       27371828//27773536
chr22:26895182-26895183(-) m6A CDS//exon       27371828//27773536
chr22:26895283-26895284(-) m6A CDS//exon       27371828//27773536
chr22:26895307-26895308(-) m6A CDS//exon       27371828//27773536
chr22:26895358-26895359(-) m6A CDS       27371828//27773536
chr22:26895589-26895590(-) m6A CDS//exon       27371828
chr22:26897880-26897881(-) m6A CDS//exon       27371828
chr22:26897942-26897943(-) m6A CDS//exon       27371828//27773536
chr22:26897983-26897984(-) m6A CDS//exon       27371828//27773536
chr22:26899668-26899669(-) m6A CDS//exon       27371828//27773536
chr22:26899702-26899703(-) Y CDS//exon       26075521
chr22:26901879-26901880(-) m6A exon//intron       27371828
chr22:26901892-26901893(-) m6A exon//intron       27371828
chr22:26902329-26902330(-) m6A CDS//exon       27773535//27371828
chr22:26902347-26902348(-) m6A CDS//exon       27773535//27371828
chr22:26902366-26902367(-) m6A CDS//exon       27773535//27371828
chr22:26902382-26902383(-) m6A CDS//exon       27773535//27371828
chr22:26902758-26902759(-) m6A CDS//exon       24209618
chr22:26902794-26902795(-) m6A CDS//exon       24209618//27371828//27773536
chr22:26906065-26906066(-) m6A CDS//exon       24284625//24209618//27773535//27371828//27773536
chr22:26906105-26906106(-) m6A CDS//exon       24284625//24209618//27773535//27371828
chr22:26906170-26906171(-) m6A CDS//exon       24284625
chr22:26908126-26908127(-) m6A 5'UTR//exon       27371828
chr22:26908140-26908141(-) m6A 5'UTR//exon       27371828
chr22:26908146-26908147(-) m6A 5'UTR//intron       27371828
chr22:26908166-26908167(-) m6A 5'UTR//intron       27371828

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate TFIP11
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)     -
Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-7
Interactor2: TFIP11

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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