Detail Information

Basic Information:


  VIRBase ID:  

VHID00055800

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-7 FYN
miRBase
Accession/Entrez ID		 zikv-mir-7 2534
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - p59-FYN//SLK//SYN

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR FYN
chr6:112048240(-) A-I      intronic
chr6:112048190(-) A-I      intronic
chr6:112048234(-) A-I      intronic
chr6:112048255(-) A-I      intronic
chr6:111987989(-) A-I      intronic
chr6:111987998(-) A-I      intronic
chr6:111986953(-) A-I      intronic
chr6:111986949(-) A-I      intronic
chr6:111986867(-) A-I      intronic
chr6:112061165(-) A-I      intronic
chr6:112061164(-) A-I      intronic
chr6:112055173(-) A-I      intronic
chr6:112062140(-) A-I      intronic
chr6:112188655(-) A-I      intronic
chr6:112061049(-) A-I      intronic
chr6:112055207(-) A-I      intronic
chr6:112055125(-) A-I      intronic
chr6:112020277(-) A-I      intronic
chr6:112020162(-) A-I      intronic
chr6:112019549(-) A-I      intronic
chr6:112019461(-) A-I      intronic
chr6:111988010(-) A-I      intronic
chr6:111987968(-) A-I      intronic
chr6:111987950(-) A-I      intronic
chr6:111987936(-) A-I      intronic
chr6:111987927(-) A-I      intronic
chr6:111987864(-) A-I      intronic
chr6:111987819(-) A-I      intronic
chr6:111986979(-) A-I      intronic
chr6:111987887(-) A-I      intronic
chr6:112099956(-) A-I      intronic
chr6:111987818(-) A-I      intronic
chr6:111988029(-) A-I      intronic
chr6:112020123(-) A-I      intronic
chr6:112188440(-) A-I      intronic
chr6:112019512(-) A-I      intronic
chr6:111987924(-) A-I      intronic
chr6:112188558(-) A-I      intronic
chr6:112062254(-) A-I      intronic
chr6:111988577(-) A-I      intronic
chr6:111988559(-) A-I      intronic
chr6:111987019(-) A-I      intronic
chr6:112188470(-) A-I      intronic
chr6:111988676(-) A-I      intronic
chr6:112072917(-) A-I      intronic
chr6:111987302(-) A-I      intronic
chr6:111986963(-) A-I      intronic
chr6:111988689(-) A-I      intronic
chr6:111988518(-) A-I      intronic
chr6:112019514(-) A-I      intronic
chr6:111988585(-) A-I      intronic
chr6:111988707(-) A-I      intronic
chr6:111988708(-) A-I      intronic
chr6:111986922(-) A-I      intronic
chr6:112020094(-) A-I      intronic
chr6:111988731(-) A-I      intronic
chr6:111988583(-) A-I      intronic
chr6:111987027(-) A-I      intronic
chr6:112019439(-) A-I      intronic
chr6:112019433(-) A-I      intronic
chr6:111986969(-) A-I      intronic
chr6:111987045(-) A-I      intronic
chr6:112064308(-) A-I      intronic
chr6:112055131(-) A-I      intronic
chr6:112019362(-) A-I      intronic
chr6:112055034(-) A-I      intronic
chr6:111987281(-) A-I      intronic
chr6:111987954(-) A-I      intronic
chr6:112099970(-) A-I      intronic
chr6:111986938(-) A-I      intronic
chr6:112055249(-) A-I      intronic
chr6:112188445(-) A-I      intronic
chr6:111987025(-) A-I      intronic
chr6:111987917(-) A-I      intronic
chr6:112019442(-) A-I      intronic
chr6:112188430(-) A-I      intronic
chr6:111987979(-) A-I      intronic
chr6:111987029(-) A-I      intronic
chr6:111986989(-) A-I      intronic
chr6:111987856(-) A-I      intronic
chr6:112187764(-) A-I      intronic
chr6:111987090(-) A-I      intronic
chr6:112020120(-) A-I      intronic
chr6:111987099(-) A-I      intronic
chr6:112064369(-) A-I      intronic
chr6:111988684(-) A-I      intronic
chr6:111990604(-) A-I      intronic
chr6:112020116(-) A-I      intronic
chr6:111987001(-) A-I      intronic
chr6:112099878(-) A-I      intronic
chr6:111988747(-) A-I      intronic
chr6:112019513(-) A-I      intronic
chr6:111986921(-) A-I      intronic
chr6:111988589(-) A-I      intronic
chr6:112188458(-) A-I      intronic
chr6:111987967(-) A-I      intronic
chr6:111987098(-) A-I      intronic
chr6:112187642(-) A-I      intronic
chr6:112002410(-) A-I      intronic
chr6:111987908(-) A-I      intronic
chr6:112020199(-) A-I      intronic
chr6:112061245(-) A-I      intronic
chr6:111987912(-) A-I      intronic
chr6:112019426(-) A-I      intronic
chr6:111987914(-) A-I      intronic
chr6:112026687(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED FYN
chr6:111985634(-) A-I intron -    15342557
chr6:111986963(-) A-I intron -    15342557
chr6:111986969(-) A-I intron -    15342557
chr6:111987025(-) A-I intron -    15342557
chr6:111987049(-) A-I intron -    15342557
chr6:111987098(-) A-I intron -    15342557
chr6:111987099(-) A-I intron -    15342557
chr6:111987908(-) A-I intron -    15342557
chr6:111987924(-) A-I intron -    15342557
chr6:111987926(-) A-I intron -    15342557
chr6:111987976(-) A-I intron -    15342557
chr6:111987979(-) A-I intron -    15342557
chr6:111987984(-) A-I intron -    15342557
chr6:111988518(-) A-I intron -    15342557
chr6:111988583(-) A-I intron -    15342557
chr6:111988585(-) A-I intron -    15342557
chr6:111988589(-) A-I intron -    15342557
chr6:111988689(-) A-I intron -    15342557
chr6:111987045(-) A-G intron -    22484847
chr6:111987924(-) A-G intron -    22484847
chr6:111987979(-) A-G intron -    22484847
chr6:111987984(-) A-G intron -    22484847
chr6:112019518(-) A-G intron -    22484847
chr6:112019615(-) A-G intron -    22484847
chr6:112019625(-) A-G intron -    22484847
chr6:112020266(-) A-G intron -    22484847
chr6:112055227(-) A-G intron -    22484847
chr6:112064369(-) A-G intron -    22484847
chr6:112157790(-) T-C intron -    22484847
chr6:112187764(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase FYN
chr6:111982047-111982048(-) m6A 3'UTR       -
chr6:111982070-111982071(-) m6A 3'UTR       -
chr6:111982111-111982112(-) m6A 3'UTR       -
chr6:111982183-111982184(-) m6A 3'UTR       -
chr6:111982520-111982521(-) m6A 3'UTR       27773535
chr6:111982675-111982676(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//22608085
chr6:111982717-111982718(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//27371828//22608085
chr6:111982734-111982735(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085
chr6:111982739-111982740(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085
chr6:111982762-111982763(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr6:111982804-111982805(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr6:111982845-111982846(-) m6A 3'UTR//exon       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr6:111982948-111982949(-) m6A CDS//exon       24284625//26404942//27773535//27371828//22608085
chr6:111982990-111982991(-) m6A CDS//exon       24284625//26404942//27773535//27371828//22608085
chr6:111983038-111983039(-) m6A CDS//exon       24284625//26404942//27773535//27371828//22608085
chr6:111983086-111983087(-) m6A CDS//exon       24284625//26404942//27773535//27371828//22608085
chr6:111983143-111983144(-) m6A CDS//exon       24284625//27773535//27371828//27773536
chr6:111995680-111995681(-) m6A exon//intron       24284625//27371828//27773536
chr6:111997731-111997732(-) m6A exon//intron       26404942
chr6:112015581-112015582(-) m6A CDS//exon       26404942
chr6:112015600-112015601(-) m6A CDS//exon       26404942
chr6:112015606-112015607(-) Tm CDS//exon       -
chr6:112015647-112015648(-) m6A CDS//exon       26404942
chr6:112015666-112015667(-) m6A CDS//exon       26404942
chr6:112017484-112017485(-) m6A CDS//exon       26404942
chr6:112017615-112017616(-) m6A CDS//exon       26404942
chr6:112017623-112017624(-) m6A CDS//exon       26404942
chr6:112017643-112017644(-) m6A CDS//exon       26404942
chr6:112021295-112021296(-) m6A exon//intron       24981863
chr6:112021340-112021341(-) m6A CDS//exon//intron       24981863
chr6:112021390-112021391(-) m6A CDS//exon//intron       24981863
chr6:112024117-112024118(-) m6A CDS//exon       26404942
chr6:112034314-112034315(-) Gm intron       -
chr6:112035554-112035555(-) Cm CDS//exon       -
chr6:112041010-112041011(-) m6A CDS//exon//intron       24284625//26404942
chr6:112041031-112041032(-) m6A CDS//exon//intron       24284625//26404942//27773535
chr6:112041051-112041052(-) m6A CDS//exon//intron       24284625//26404942//27773535
chr6:112041074-112041075(-) m6A CDS//exon       24284625//26404942//27773535
chr6:112041156-112041157(-) m6A CDS//exon       24284625//26404942//27773535
chr6:112041186-112041187(-) m6A CDS//exon       24284625//26404942//27773535
chr6:112041215-112041216(-) m6A CDS//exon       24284625//26404942//27773535
chr6:112062189-112062190(-) m6A 5'UTR//exon//intron       24284625//27773535
chr6:112080191-112080192(-) m6A 5'UTR//intron       24284625//26404942//27371828
chr6:112080200-112080201(-) m6A 5'UTR//intron       24284625//26404942//27371828
chr6:112080213-112080214(-) m6A 5'UTR//intron       24284625//26404942//27371828
chr6:112080236-112080237(-) m6A 5'UTR//intron       24284625//26404942//27371828
chr6:112080286-112080287(-) m6A 5'UTR//intron       24284625//26404942//27371828
chr6:112081093-112081094(-) m6A 5'UTR//exon//intron       26404942
chr6:112081122-112081123(-) m6A exon//intron       26404942
chr6:112101775-112101776(-) m6A 5'UTR//exon//intron       26404942
chr6:112101811-112101812(-) m6A 5'UTR//exon//intron       26404942
chr6:112114946-112114947(-) m6A 5'UTR//intron       -
chr6:112115082-112115083(-) m6A 5'UTR//intron       -
chr6:112119568-112119569(-) m6A 5'UTR//intron       -
chr6:112194253-112194254(-) m6A 5'UTR       27773536
chr6:112194315-112194316(-) m6A 5'UTR       27773536
chr6:112194406-112194407(-) m6A 5'UTR       24209618//27371828//27773536
chr6:112194507-112194508(-) m6A 5'UTR       24284625//24209618//24981863//27371828//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate FYN
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HeLa-S3 cells     -
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-7
Interactor2: FYN

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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