Detail Information

Basic Information:


  VIRBase ID:  

VHID00054927

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-6 TMEM178B
miRBase
Accession/Entrez ID		 zikv-mir-6 100507421
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TMEM178B
chr7:140774195-140774196(+) m6A CDS//exon       22608085
chr7:140774231-140774232(+) m6A CDS//exon       22608085
chr7:140774327-140774328(+) m6A CDS//exon       22608085
chr7:140774343-140774344(+) m6A CDS//exon       22608085
chr7:141170417-141170418(+) m6A CDS       -
chr7:141170541-141170542(+) m6A CDS       22608085
chr7:141170561-141170562(+) m6A CDS       22608085
chr7:141170574-141170575(+) m6A CDS       22608085
chr7:141170589-141170590(+) m6A 3'UTR       24981863//22608085
chr7:141170647-141170648(+) m6A 3'UTR       24981863//22608085
chr7:141170652-141170653(+) m6A 3'UTR       24981863//22608085
chr7:141170657-141170658(+) m6A 3'UTR       24981863//22608085
chr7:141170723-141170724(+) m6A 3'UTR       24981863//22608085
chr7:141170817-141170818(+) m6A 3'UTR       25456834//24981863//22608085
chr7:141170826-141170827(+) m6A 3'UTR       25456834//24981863//22608085
chr7:141170887-141170888(+) m6A 3'UTR       25456834//24981863//22608085
chr7:141171071-141171072(+) m6A 3'UTR       25456834//24981863//22608085
chr7:141171117-141171118(+) m6A 3'UTR       25456834//24981863//22608085
chr7:141171152-141171153(+) m6A 3'UTR       25456834//24981863//22608085
chr7:141171160-141171161(+) m6A 3'UTR       25456834//24981863//22608085
chr7:141171190-141171191(+) m6A 3'UTR       25456834//24981863//22608085
chr7:141171245-141171246(+) m6A 3'UTR       25456834//24981863//22608085
chr7:141171286-141171287(+) m6A 3'UTR       25456834//24981863//22608085
chr7:141171332-141171333(+) m6A 3'UTR       25456834//22608085
chr7:141171706-141171707(+) m6A 3'UTR       22608085
chr7:141171713-141171714(+) m6A 3'UTR       22608085
chr7:141171734-141171735(+) m6A 3'UTR       25456834//24981863//22608085
chr7:141171766-141171767(+) m6A 3'UTR       25456834//24981863//22608085
chr7:141171805-141171806(+) m6A 3'UTR       25456834//24981863//22608085
chr7:141171843-141171844(+) m6A 3'UTR       25456834//24981863//22608085
chr7:141171896-141171897(+) m6A 3'UTR       24981863//22608085
chr7:141171902-141171903(+) m6A 3'UTR       24981863//22608085
chr7:141171911-141171912(+) m6A 3'UTR       24981863//22608085
chr7:141171951-141171952(+) m6A 3'UTR       24981863//22608085
chr7:141172073-141172074(+) m6A 3'UTR       24981863
chr7:141173784-141173785(+) m6A 3'UTR       -
chr7:141173811-141173812(+) m6A 3'UTR       -
chr7:141178000-141178001(+) m6A 3'UTR       24981863
chr7:141179853-141179854(+) m6A 3'UTR       25456834//22608085
chr7:141179866-141179867(+) m6A 3'UTR       25456834//22608085
chr7:141179956-141179957(+) m6A 3'UTR       25456834//24981863//22608085
chr7:141179982-141179983(+) m6A 3'UTR       25456834//24981863//22608085
chr7:141179993-141179994(+) m6A 3'UTR       25456834//24981863//22608085
chr7:141180062-141180063(+) m6A 3'UTR       25456834//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate TMEM178B
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-6
Interactor2: TMEM178B

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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