Detail Information

Basic Information:


  VIRBase ID:  

VHID00054771

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-6 HCN1
miRBase
Accession/Entrez ID		 zikv-mir-6 348980
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - BCNG-1//BCNG1//DEE24//EIEE24//GEFSP10//HAC-2

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR HCN1
chr5:45264129(-) A-I      intronic
chr5:45611336(-) A-I      intronic
chr5:45611333(-) A-I      intronic
chr5:45264130(-) A-I      intronic
chr5:45537751(-) A-I      intronic
chr5:45593955(-) A-I      intronic
chr5:45539643(-) A-I      intronic
chr5:45540650(-) A-I      intronic
chr5:45281965(-) A-I      intronic
chr5:45559142(-) A-I      intronic
chr5:45265128(-) A-I      intronic
chr5:45611538(-) A-I      intronic
chr5:45646614(-) A-I      intronic
chr5:45562517(-) A-I      intronic
chr5:45593956(-) A-I      intronic
chr5:45459301(-) A-I      intronic
chr5:45611470(-) A-I      intronic
chr5:45646613(-) A-I      intronic
chr5:45611249(-) A-I      intronic
chr5:45540691(-) A-I      intronic
chr5:45535592(-) A-I      intronic
chr5:45537713(-) A-I      intronic
chr5:45281828(-) A-I      intronic
chr5:45611449(-) A-I      intronic
chr5:45537778(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase HCN1
chr5:45262286-45262287(-) m6A CDS       25456834
chr5:45262426-45262427(-) m6A CDS       25456834
chr5:45262459-45262460(-) m6A CDS       25456834
chr5:45262549-45262550(-) m6A CDS       25456834
chr5:45262636-45262637(-) m6A CDS       25456834
chr5:45645569-45645570(-) m6A CDS       24209618
chr5:45645624-45645625(-) m6A CDS       24209618
chr5:45695810-45695811(-) m6A CDS       24209618

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate HCN1
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-6
Interactor2: HCN1

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

Starting a new search, please wait ...