Detail Information

Basic Information:


  VIRBase ID:  

VHID00053256

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-6 ATF7IP
miRBase
Accession/Entrez ID		 zikv-mir-6 55729
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - AM//ATF-IP//MCAF//MCAF1//p621

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ATF7IP
chr12:14592587(+) A-I      intronic
chr12:14592536(+) A-I      intronic
chr12:14592501(+) A-I      intronic
chr12:14592555(+) A-I      intronic
chr12:14592562(+) A-I      intronic
chr12:14592569(+) A-I      intronic
chr12:14592578(+) A-I      intronic
chr12:14592581(+) A-I      intronic
chr12:14600345(+) A-I      intronic
chr12:14607966(+) A-I      intronic
chr12:14608006(+) A-I      intronic
chr12:14607982(+) A-I      intronic
chr12:14529823(+) A-I      intronic
chr12:14530033(+) A-I      intronic
chr12:14600296(+) A-I      intronic
chr12:14600320(+) A-I      intronic
chr12:14530642(+) A-I      intronic
chr12:14600396(+) A-I      intronic
chr12:14530003(+) A-I      intronic
chr12:14600458(+) A-I      intronic
chr12:14584428(+) A-I      intronic
chr12:14606579(+) A-I      intronic
chr12:14529809(+) A-I      intronic
chr12:14580572(+) A-I      intronic
chr12:14592656(+) A-I      intronic
chr12:14606659(+) A-I      intronic
chr12:14606698(+) A-I      intronic
chr12:14530370(+) A-I      intronic
chr12:14584429(+) A-I      intronic
chr12:14599101(+) A-I      intronic
chr12:14606708(+) A-I      intronic
chr12:14599156(+) A-I      intronic
chr12:14529762(+) A-I      intronic
chr12:14573458(+) A-I      intronic
chr12:14584535(+) A-I      intronic
chr12:14599105(+) A-I      intronic
chr12:14600237(+) A-I      intronic
chr12:14608053(+) A-I      intronic
chr12:14530647(+) A-I      intronic
chr12:14592617(+) A-I      intronic
chr12:14618078(+) A-I      intronic
chr12:14530220(+) A-I      intronic
chr12:14599188(+) A-I      intronic
chr12:14607951(+) A-I      intronic
chr12:14536561(+) A-I      intronic
chr12:14534951(+) A-I      intronic
chr12:14600462(+) A-I      intronic
chr12:14580174(+) A-I      intronic
chr12:14584408(+) A-I      intronic
chr12:14567977(+) A-I      intronic
chr12:14534245(+) A-I      intronic
chr12:14608040(+) A-I      intronic
chr12:14534224(+) A-I      intronic
chr12:14567980(+) A-I      intronic
chr12:14559172(+) A-I      intronic
chr12:14529781(+) A-I      intronic
chr12:14549918(+) A-I      intronic
chr12:14618150(+) A-I      intronic
chr12:14549939(+) A-I      intronic
chr12:14549949(+) A-I      intronic
chr12:14608759(+) A-I      intronic
chr12:14523061(+) A-I      intronic
chr12:14580575(+) A-I      intronic
chr12:14530648(+) A-I      intronic
chr12:14608791(+) A-I      intronic
chr12:14529792(+) A-I      intronic
chr12:14529788(+) A-I      intronic
chr12:14606639(+) A-I      intronic
chr12:14592523(+) A-I      intronic
chr12:14529980(+) A-I      intronic
chr12:14580560(+) A-I      intronic
chr12:14596014(+) A-I      intronic
chr12:14534296(+) A-I      intronic
chr12:14608023(+) A-I      intronic
chr12:14600368(+) A-I      intronic
chr12:14606580(+) A-I      intronic
chr12:14607844(+) A-I      intronic
chr12:14530604(+) A-I      intronic
chr12:14607849(+) A-I      intronic
chr12:14529810(+) A-I      intronic
chr12:14622141(+) A-I      intronic
chr12:14549934(+) A-I      intronic
chr12:14530028(+) A-I      intronic
chr12:14530022(+) A-I      intronic
chr12:14606577(+) A-I      intronic
chr12:14595834(+) A-I      intronic
chr12:14608051(+) A-I      intronic
chr12:14530383(+) A-I      intronic
chr12:14600413(+) A-I      intronic
chr12:14592646(+) A-I      intronic
chr12:14530603(+) A-I      intronic
chr12:14586391(+) A-I      intronic
chr12:14592633(+) A-I      intronic
chr12:14608120(+) A-I      intronic
chr12:14529780(+) A-I      intronic
chr12:14530341(+) A-I      intronic
chr12:14592579(+) A-I      intronic
chr12:14608112(+) A-I      intronic
chr12:14592493(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ATF7IP
chr12:14587298(+) A-I exon CDS    19478186
chr12:14646701(+) A-C intron -    22484847
chr12:14522059(+) T-C intron -    22484847
chr12:14522060(+) T-C intron -    22484847
chr12:14529780(+) A-G intron -    22484847
chr12:14529792(+) A-G intron -    22484847
chr12:14529810(+) A-G intron -    22484847
chr12:14530022(+) A-G intron -    22484847
chr12:14530028(+) A-G intron -    22484847
chr12:14530341(+) A-G intron -    22484847
chr12:14530383(+) A-G intron -    22484847
chr12:14530603(+) A-G intron -    22484847
chr12:14530604(+) A-G intron -    22484847
chr12:14530648(+) A-G intron -    22484847
chr12:14533711(+) G-A intron -    22484847
chr12:14534245(+) A-G intron -    22484847
chr12:14534296(+) A-G intron -    22484847
chr12:14565766(+) G-A intron -    22484847
chr12:14584408(+) A-G intron -    22484847
chr12:14592579(+) A-G intron -    22484847
chr12:14592593(+) T-C intron -    22484847
chr12:14592646(+) A-G intron -    22484847
chr12:14592691(+) T-C intron -    22484847
chr12:14595884(+) T-A intron -    22484847
chr12:14595886(+) C-T intron -    22484847
chr12:14600368(+) A-G intron -    22484847
chr12:14606577(+) A-G intron -    22484847
chr12:14606580(+) A-G intron -    22484847
chr12:14606639(+) A-G intron -    22484847
chr12:14607844(+) A-G intron -    22484847
chr12:14607849(+) A-G intron -    22484847
chr12:14610461(+) T-C intron -    22484847
chr12:14611594(+) A-T intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ATF7IP
chr12:14518725-14518726(+) m6A 5'UTR//exon       24981863
chr12:14576817-14576818(+) m6A 5'UTR//intron       24981863
chr12:14576853-14576854(+) m6A CDS//exon//intron       24284625//24209618//24981863//22608085
chr12:14576866-14576867(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//22608085
chr12:14576953-14576954(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr12:14576963-14576964(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr12:14577009-14577010(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr12:14577030-14577031(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr12:14577048-14577049(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr12:14577119-14577120(+) m6A CDS//exon//intron       24284625//24209618//24981863//26404942//22575960//22608085
chr12:14577150-14577151(+) m6A CDS//exon//intron       24284625//24209618//24981863//26404942//22575960//22608085
chr12:14577178-14577179(+) m6A CDS//exon//intron       24284625//24209618//24981863//26404942//22575960//22608085
chr12:14577208-14577209(+) m6A CDS//exon//intron       24284625//24209618//24981863//26404942//22575960//22608085
chr12:14577220-14577221(+) m6A CDS//exon//intron       24284625//24981863//22608085
chr12:14577232-14577233(+) m6A CDS//exon//intron       24284625//24981863//22608085
chr12:14577487-14577488(+) m6A CDS//exon//intron       24284625//24209618//22608085
chr12:14577502-14577503(+) m6A CDS//exon//intron       24284625//24209618//22608085
chr12:14577637-14577638(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr12:14577667-14577668(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr12:14577718-14577719(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr12:14577742-14577743(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr12:14577769-14577770(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085
chr12:14577846-14577847(+) m6A CDS//exon//intron       24284625//24209618//24981863//26404942//27773535//22608085
chr12:14577899-14577900(+) m6A CDS//exon//intron       24981863//22608085
chr12:14577908-14577909(+) m6A CDS//exon//intron       24981863//22608085
chr12:14578052-14578053(+) m6A CDS//exon//intron       24981863//22608085
chr12:14578131-14578132(+) m6A CDS//exon//intron       24981863//26404942//22608085
chr12:14578142-14578143(+) m6A CDS//exon//intron       25456834//24981863//26404942//22608085
chr12:14578192-14578193(+) m6A CDS//exon//intron       25456834//24981863//26404942//22608085
chr12:14578211-14578212(+) m6A CDS//exon//intron       25456834//24981863//26404942//22608085
chr12:14578235-14578236(+) m6A CDS//exon//intron       24981863//26404942//22608085
chr12:14578288-14578289(+) m6A CDS//exon//intron       24981863//22608085
chr12:14587294-14587295(+) m6A 5'UTR//CDS//exon//intron       24981863//27773535
chr12:14587301-14587302(+) m6A 5'UTR//CDS//exon//intron       24981863//27773535
chr12:14587343-14587344(+) m6A 5'UTR//CDS//exon//intron       24981863//27773535
chr12:14589075-14589076(+) m6A 5'UTR//CDS//exon//intron       24981863//27773535
chr12:14589081-14589082(+) m6A CDS//exon//intron       24981863//27773535
chr12:14591123-14591124(+) m6A CDS//exon       24981863
chr12:14591141-14591142(+) m6A CDS//exon       24981863//27773535
chr12:14591180-14591181(+) m6A CDS//exon       24981863//27773535
chr12:14591194-14591195(+) m6A CDS//exon       24981863//27773535
chr12:14599980-14599981(+) m6A CDS//exon       24981863//27773535
chr12:14609527-14609528(+) m6A CDS//exon       24981863//27773535
chr12:14610158-14610159(+) m6A CDS//exon//intron       24981863
chr12:14613487-14613488(+) m6A CDS//exon       24284625
chr12:14613679-14613680(+) m6A CDS//exon       24284625//24209618//24981863//22608085
chr12:14613798-14613799(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085
chr12:14613803-14613804(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085
chr12:14613842-14613843(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085
chr12:14613871-14613872(+) m6A CDS//exon       24284625//24209618//24981863//22608085
chr12:14613928-14613929(+) m6A CDS//exon       24284625//24209618//24981863//22608085
chr12:14613957-14613958(+) m6A CDS//exon       24284625//24209618//24981863//22608085
chr12:14614038-14614039(+) m6A CDS//exon       24284625//24981863
chr12:14614043-14614044(+) m6A CDS//exon       24284625//24981863
chr12:14619086-14619087(+) m6A exon//intron       24981863
chr12:14631260-14631261(+) m6A CDS       24284625//24981863
chr12:14631371-14631372(+) m6A CDS       24284625//24981863
chr12:14631381-14631382(+) m6A CDS       24284625//24981863
chr12:14635007-14635008(+) m6A 3'UTR//intron       -
chr12:14635018-14635019(+) m6A 3'UTR//intron       -
chr12:14649187-14649188(+) m6A CDS       24284625//24209618
chr12:14649206-14649207(+) m6A CDS       24284625//24209618
chr12:14649213-14649214(+) m6A CDS       24284625//24209618
chr12:14649234-14649235(+) m6A CDS       24284625//24209618
chr12:14650805-14650806(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085
chr12:14651007-14651008(+) m6A 3'UTR       24284625//24981863//22608085
chr12:14651116-14651117(+) m6A 3'UTR       24284625

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ATF7IP
Chromatin K562 cells     -
Cytosol K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells|K562 cells     -
Ribosome-free cytosol Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-6
Interactor2: ATF7IP

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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