Detail Information

Basic Information:


  VIRBase ID:  

VHID00052053

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-6 CKAP5
miRBase
Accession/Entrez ID		 zikv-mir-6 9793
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - ch-TOG//CHTOG//MSPS//TOG//TOGp

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CKAP5
chr11:46776517(-) A-I      NonSyn:Asn->Ser
chr11:46776531(-) A-I      Syn:Leu->Leu
chr11:46776530(-) A-I      NonSyn:Arg->Gly
chr11:46776504(-) A-I      Syn:Ala->Ala
chr11:46814046(-) A-I      intronic
chr11:46778798(-) A-I      intronic
chr11:46843533(-) A-I      intronic
chr11:46777200(-) A-I      intronic
chr11:46812970(-) A-I      intronic
chr11:46807163(-) A-I      intronic
chr11:46863361(-) A-I      intronic
chr11:46866368(-) A-I      intronic
chr11:46780240(-) A-I      intronic
chr11:46825019(-) A-I      intronic
chr11:46864442(-) A-I      intronic
chr11:46807483(-) A-I      intronic
chr11:46813197(-) A-I      intronic
chr11:46864418(-) A-I      intronic
chr11:46791002(-) A-I      intronic
chr11:46791080(-) A-I      intronic
chr11:46791138(-) A-I      intronic
chr11:46800399(-) A-I      intronic
chr11:46800567(-) A-I      intronic
chr11:46800856(-) A-I      intronic
chr11:46800876(-) A-I      intronic
chr11:46800878(-) A-I      intronic
chr11:46864379(-) A-I      intronic
chr11:46864305(-) A-I      intronic
chr11:46856564(-) A-I      intronic
chr11:46856399(-) A-I      intronic
chr11:46856008(-) A-I      intronic
chr11:46855994(-) A-I      intronic
chr11:46855987(-) A-I      intronic
chr11:46855951(-) A-I      intronic
chr11:46825084(-) A-I      intronic
chr11:46855622(-) A-I      intronic
chr11:46855600(-) A-I      intronic
chr11:46855559(-) A-I      intronic
chr11:46855558(-) A-I      intronic
chr11:46855549(-) A-I      intronic
chr11:46855209(-) A-I      intronic
chr11:46855203(-) A-I      intronic
chr11:46855200(-) A-I      intronic
chr11:46855186(-) A-I      intronic
chr11:46853504(-) A-I      intronic
chr11:46853188(-) A-I      intronic
chr11:46852516(-) A-I      intronic
chr11:46800925(-) A-I      intronic
chr11:46805371(-) A-I      intronic
chr11:46805423(-) A-I      intronic
chr11:46807310(-) A-I      intronic
chr11:46820018(-) A-I      intronic
chr11:46805431(-) A-I      intronic
chr11:46805433(-) A-I      intronic
chr11:46805434(-) A-I      intronic
chr11:46852504(-) A-I      intronic
chr11:46805449(-) A-I      intronic
chr11:46805535(-) A-I      intronic
chr11:46805753(-) A-I      intronic
chr11:46805755(-) A-I      intronic
chr11:46805756(-) A-I      intronic
chr11:46805835(-) A-I      intronic
chr11:46807062(-) A-I      intronic
chr11:46852467(-) A-I      intronic
chr11:46807373(-) A-I      intronic
chr11:46844699(-) A-I      intronic
chr11:46844620(-) A-I      intronic
chr11:46844597(-) A-I      intronic
chr11:46843799(-) A-I      intronic
chr11:46843597(-) A-I      intronic
chr11:46843588(-) A-I      intronic
chr11:46771414(-) A-I      intronic
chr11:46843514(-) A-I      intronic
chr11:46843481(-) A-I      intronic
chr11:46843476(-) A-I      intronic
chr11:46843468(-) A-I      intronic
chr11:46770233(-) A-I      intronic
chr11:46843450(-) A-I      intronic
chr11:46800594(-) A-I      intronic
chr11:46843355(-) A-I      intronic
chr11:46834495(-) A-I      intronic
chr11:46813167(-) A-I      intronic
chr11:46833759(-) A-I      intronic
chr11:46778960(-) A-I      intronic
chr11:46833716(-) A-I      intronic
chr11:46833665(-) A-I      intronic
chr11:46833639(-) A-I      intronic
chr11:46833286(-) A-I      intronic
chr11:46833226(-) A-I      intronic
chr11:46825097(-) A-I      intronic
chr11:46825091(-) A-I      intronic
chr11:46825090(-) A-I      intronic
chr11:46864396(-) A-I      intronic
chr11:46821475(-) A-I      intronic
chr11:46833798(-) A-I      intronic
chr11:46832136(-) A-I      intronic
chr11:46853454(-) A-I      intronic
chr11:46843556(-) A-I      intronic
chr11:46844138(-) A-I      intronic
chr11:46866261(-) A-I      intronic
chr11:46803452(-) A-I      intronic
chr11:46812972(-) A-I      intronic
chr11:46778337(-) A-I      intronic
chr11:46824584(-) A-I      intronic
chr11:46800786(-) A-I      intronic
chr11:46778587(-) A-I      intronic
chr11:46824732(-) A-I      intronic
chr11:46770577(-) A-I      intronic
chr11:46800847(-) A-I      intronic
chr11:46844113(-) A-I      intronic
chr11:46806982(-) A-I      intronic
chr11:46833129(-) A-I      intronic
chr11:46812348(-) A-I      intronic
chr11:46770449(-) A-I      intronic
chr11:46801436(-) A-I      intronic
chr11:46791189(-) A-I      intronic
chr11:46807050(-) A-I      intronic
chr11:46807048(-) A-I      intronic
chr11:46779391(-) A-I      intronic
chr11:46812452(-) A-I      intronic
chr11:46819998(-) A-I      intronic
chr11:46776901(-) A-I      intronic
chr11:46855898(-) A-I      intronic
chr11:46853134(-) A-I      intronic
chr11:46838545(-) A-I      intronic
chr11:46777038(-) A-I      intronic
chr11:46800477(-) A-I      intronic
chr11:46843544(-) A-I      intronic
chr11:46789481(-) A-I      intronic
chr11:46807303(-) A-I      intronic
chr11:46780250(-) A-I      intronic
chr11:46800879(-) A-I      intronic
chr11:46812484(-) A-I      intronic
chr11:46824957(-) A-I      intronic
chr11:46813037(-) A-I      intronic
chr11:46864262(-) A-I      intronic
chr11:46770052(-) A-I      intronic
chr11:46770131(-) A-I      intronic
chr11:46812325(-) A-I      intronic
chr11:46843546(-) A-I      intronic
chr11:46800834(-) A-I      intronic
chr11:46835600(-) A-I      intronic
chr11:46843710(-) A-I      intronic
chr11:46778343(-) A-I      intronic
chr11:46770153(-) A-I      intronic
chr11:46770207(-) A-I      intronic
chr11:46770219(-) A-I      intronic
chr11:46853258(-) A-I      intronic
chr11:46770256(-) A-I      intronic
chr11:46838731(-) A-I      intronic
chr11:46770484(-) A-I      intronic
chr11:46770490(-) A-I      intronic
chr11:46770491(-) A-I      intronic
chr11:46770546(-) A-I      intronic
chr11:46770555(-) A-I      intronic
chr11:46770560(-) A-I      intronic
chr11:46770564(-) A-I      intronic
chr11:46770748(-) A-I      intronic
chr11:46770841(-) A-I      intronic
chr11:46770867(-) A-I      intronic
chr11:46770893(-) A-I      intronic
chr11:46777453(-) A-I      intronic
chr11:46778895(-) A-I      intronic
chr11:46780160(-) A-I      intronic
chr11:46866330(-) A-I      intronic
chr11:46833710(-) A-I      intronic
chr11:46770922(-) A-I      intronic
chr11:46807413(-) A-I      intronic
chr11:46824979(-) A-I      intronic
chr11:46824993(-) A-I      intronic
chr11:46805499(-) A-I      intronic
chr11:46780159(-) A-I      intronic
chr11:46824994(-) A-I      intronic
chr11:46812396(-) A-I      intronic
chr11:46866245(-) A-I      intronic
chr11:46813923(-) A-I      intronic
chr11:46820043(-) A-I      intronic
chr11:46812402(-) A-I      intronic
chr11:46778509(-) A-I      intronic
chr11:46791003(-) A-I      intronic
chr11:46776885(-) A-I      intronic
chr11:46812361(-) A-I      intronic
chr11:46779473(-) A-I      intronic
chr11:46812482(-) A-I      intronic
chr11:46823994(-) A-I      intronic
chr11:46856459(-) A-I      intronic
chr11:46779315(-) A-I      intronic
chr11:46805879(-) A-I      intronic
chr11:46770479(-) A-I      intronic
chr11:46777030(-) A-I      intronic
chr11:46800544(-) A-I      intronic
chr11:46853329(-) A-I      intronic
chr11:46827404(-) A-I      intronic
chr11:46844660(-) A-I      intronic
chr11:46778409(-) A-I      intronic
chr11:46770520(-) A-I      intronic
chr11:46800751(-) A-I      intronic
chr11:46779545(-) A-I      intronic
chr11:46790701(-) A-I      intronic
chr11:46824554(-) A-I      intronic
chr11:46838712(-) A-I      intronic
chr11:46853228(-) A-I      intronic
chr11:46820047(-) A-I      intronic
chr11:46770493(-) A-I      intronic
chr11:46853544(-) A-I      intronic
chr11:46824579(-) A-I      intronic
chr11:46844609(-) A-I      intronic
chr11:46780243(-) A-I      intronic
chr11:46843049(-) A-I      intronic
chr11:46825036(-) A-I      intronic
chr11:46853158(-) A-I      intronic
chr11:46854425(-) A-I      intronic
chr11:46844701(-) A-I      intronic
chr11:46776902(-) A-I      intronic
chr11:46856429(-) A-I      intronic
chr11:46820652(-) A-I      intronic
chr11:46812266(-) A-I      intronic
chr11:46843478(-) A-I      intronic
chr11:46864329(-) A-I      intronic
chr11:46813019(-) A-I      intronic
chr11:46855624(-) A-I      intronic
chr11:46770953(-) A-I      intronic
chr11:46800851(-) A-I      intronic
chr11:46844604(-) A-I      intronic
chr11:46843775(-) A-I      intronic
chr11:46855640(-) A-I      intronic
chr11:46805438(-) A-I      intronic
chr11:46800445(-) A-I      intronic
chr11:46770068(-) A-I      intronic
chr11:46780125(-) A-I      intronic
chr11:46791194(-) A-I      intronic
chr11:46812404(-) A-I      intronic
chr11:46812265(-) A-I      intronic
chr11:46774694(-) A-I      intronic
chr11:46778871(-) A-I      intronic
chr11:46855168(-) A-I      intronic
chr11:46789440(-) A-I      intronic
chr11:46789824(-) A-I      intronic
chr11:46776892(-) A-I      intronic
chr11:46853628(-) A-I      intronic
chr11:46824915(-) A-I      intronic
chr11:46854396(-) A-I      intronic
chr11:46790296(-) A-I      intronic
chr11:46853246(-) A-I      intronic
chr11:46805435(-) A-I      intronic
chr11:46853204(-) A-I      intronic
chr11:46824970(-) A-I      intronic
chr11:46778590(-) A-I      intronic
chr11:46827387(-) A-I      intronic
chr11:46843576(-) A-I      intronic
chr11:46791097(-) A-I      intronic
chr11:46827375(-) A-I      intronic
chr11:46866278(-) A-I      intronic
chr11:46800617(-) A-I      intronic
chr11:46853615(-) A-I      intronic
chr11:46824916(-) A-I      intronic
chr11:46824665(-) A-I      intronic
chr11:46844686(-) A-I      intronic
chr11:46800554(-) A-I      intronic
chr11:46770197(-) A-I      intronic
chr11:46780134(-) A-I      intronic
chr11:46800852(-) A-I      intronic
chr11:46777029(-) A-I      intronic
chr11:46807049(-) A-I      intronic
chr11:46865156(-) A-I      intronic
chr11:46834411(-) A-I      intronic
chr11:46780106(-) A-I      intronic
chr11:46853250(-) A-I      intronic
chr11:46811090(-) A-I      intronic
chr11:46833702(-) A-I      intronic
chr11:46853177(-) A-I      intronic
chr11:46780255(-) A-I      intronic
chr11:46777362(-) A-I      intronic
chr11:46771464(-) A-I      intronic
chr11:46807412(-) A-I      intronic
chr11:46820719(-) A-I      intronic
chr11:46779320(-) A-I      intronic
chr11:46778460(-) A-I      intronic
chr11:46779276(-) A-I      intronic
chr11:46844678(-) A-I      intronic
chr11:46838642(-) A-I      intronic
chr11:46770474(-) A-I      intronic
chr11:46852384(-) A-I      intronic
chr11:46808632(-) A-I      intronic
chr11:46802334(-) A-I      intronic
chr11:46778991(-) A-I      intronic
chr11:46779278(-) A-I      intronic
chr11:46807259(-) A-I      intronic
chr11:46824982(-) A-I      intronic
chr11:46800547(-) A-I      intronic
chr11:46812329(-) A-I      intronic
chr11:46800403(-) A-I      intronic
chr11:46779190(-) A-I      intronic
chr11:46843746(-) A-I      intronic
chr11:46838773(-) A-I      intronic
chr11:46824731(-) A-I      intronic
chr11:46853356(-) A-I      intronic
chr11:46855588(-) A-I      intronic
chr11:46800955(-) A-I      intronic
chr11:46776795(-) A-I      intronic
chr11:46812376(-) A-I      intronic
chr11:46779240(-) A-I      intronic
chr11:46825016(-) A-I      intronic
chr11:46778860(-) A-I      intronic
chr11:46865673(-) A-I      intronic
chr11:46838804(-) A-I      intronic
chr11:46853218(-) A-I      intronic
chr11:46820693(-) A-I      intronic
chr11:46770286(-) A-I      intronic
chr11:46866434(-) A-I      intronic
chr11:46812994(-) A-I      intronic
chr11:46777367(-) A-I      intronic
chr11:46778333(-) A-I      intronic
chr11:46855625(-) A-I      intronic
chr11:46824679(-) A-I      intronic
chr11:46856425(-) A-I      intronic
chr11:46813987(-) A-I      intronic
chr11:46778817(-) A-I      intronic
chr11:46853355(-) A-I      intronic
chr11:46807051(-) A-I      intronic
chr11:46791082(-) A-I      intronic
chr11:46825050(-) A-I      intronic
chr11:46805429(-) A-I      intronic
chr11:46812414(-) A-I      intronic
chr11:46779365(-) A-I      intronic
chr11:46780194(-) A-I      intronic
chr11:46801444(-) A-I      intronic
chr11:46825104(-) A-I      intronic
chr11:46833781(-) A-I      intronic
chr11:46805432(-) A-I      intronic
chr11:46780177(-) A-I      intronic
chr11:46843749(-) A-I      intronic
chr11:46770576(-) A-I      intronic
chr11:46834489(-) A-I      intronic
chr11:46805874(-) A-I      intronic
chr11:46855958(-) A-I      intronic
chr11:46800408(-) A-I      intronic
chr11:46770510(-) A-I      intronic
chr11:46801418(-) A-I      intronic
chr11:46824926(-) A-I      intronic
chr11:46807433(-) A-I      intronic
chr11:46813228(-) A-I      intronic
chr11:46770506(-) A-I      intronic
chr11:46824738(-) A-I      intronic
chr11:46791124(-) A-I      intronic
chr11:46864406(-) A-I      intronic
chr11:46838574(-) A-I      intronic
chr11:46821292(-) A-I      intronic
chr11:46813900(-) A-I      intronic
chr11:46824751(-) A-I      intronic
chr11:46780163(-) A-I      intronic
chr11:46807466(-) A-I      intronic
chr11:46813112(-) A-I      intronic
chr11:46812946(-) A-I      intronic
chr11:46812425(-) A-I      intronic
chr11:46803461(-) A-I      intronic
chr11:46812847(-) A-I      intronic
chr11:46778786(-) A-I      intronic
chr11:46855585(-) A-I      intronic
chr11:46778877(-) A-I      intronic
chr11:46800543(-) A-I      intronic
chr11:46805528(-) A-I      intronic
chr11:46777396(-) A-I      intronic
chr11:46856485(-) A-I      intronic
chr11:46777222(-) A-I      intronic
chr11:46800842(-) A-I      intronic
chr11:46833638(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CKAP5
chr11:46801418(-) A-I intron -    15258596
chr11:46801436(-) A-I intron -    15258596
chr11:46801444(-) A-I intron -    15258596
chr11:46801502(-) A-I intron -    15258596
chr11:46807048(-) A-I intron -    22327324
chr11:46807049(-) A-I intron -    22327324
chr11:46853355(-) A-I intron -    21960545
chr11:46853356(-) A-I intron -    21960545
chr11:46770922(-) A-G intron -    22484847
chr11:46778877(-) A-G intron -    22484847
chr11:46780163(-) A-G intron -    22484847
chr11:46791194(-) A-G intron -    22484847
chr11:46800879(-) A-G intron -    22484847
chr11:46801418(-) A-G intron -    22484847
chr11:46807048(-) A-G intron -    22484847
chr11:46807049(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CKAP5
chr11:46765222-46765223(-) m6A 3'UTR       24284625//27773535
chr11:46765336-46765337(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr11:46765344-46765345(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr11:46765372-46765373(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr11:46765477-46765478(-) m6A 3'UTR       24284625//24209618//24981863//28052920//27773535//22575960//22608085
chr11:46765528-46765529(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr11:46765602-46765603(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr11:46765652-46765653(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr11:46765667-46765668(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr11:46765684-46765685(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085
chr11:46765728-46765729(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr11:46765744-46765745(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr11:46765776-46765777(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr11:46765839-46765840(-) m6A 3'UTR//intron       24284625//27773535
chr11:46771980-46771981(-) m6A CDS//exon       24981863//26404942
chr11:46772087-46772088(-) m6A CDS//exon       24981863//26404942
chr11:46772690-46772691(-) m6A CDS//exon       24981863//27773535
chr11:46772714-46772715(-) m6A CDS//exon       24981863//27773535
chr11:46772719-46772720(-) m6A CDS//exon       24981863//27773535
chr11:46772797-46772798(-) m6A CDS//exon       24981863//27773535
chr11:46772933-46772934(-) m6A CDS//exon       24981863//27773535
chr11:46772942-46772943(-) m6A CDS//exon       27773535
chr11:46772976-46772977(-) m6A CDS//exon       27773535
chr11:46773028-46773029(-) m6A CDS//exon       27773535
chr11:46776591-46776592(-) m6A CDS//exon//intron       26404942
chr11:46776599-46776600(-) m6A CDS//exon//intron       26404942
chr11:46780474-46780475(-) Cm CDS//exon       -
chr11:46786753-46786754(-) m6A CDS//exon       24981863
chr11:46786775-46786776(-) m6A CDS//exon       24981863
chr11:46789172-46789173(-) m6A CDS//exon       24981863//27773535
chr11:46789178-46789179(-) m6A CDS//exon       24981863//27773535
chr11:46791555-46791556(-) m6A CDS//exon       24981863//27773535
chr11:46800060-46800061(-) Cm CDS       -
chr11:46806126-46806127(-) Am CDS//exon       -
chr11:46806128-46806129(-) m6A CDS//exon       22575960
chr11:46812048-46812049(-) m6A CDS       24981863//28052920
chr11:46812055-46812056(-) m6A CDS       24981863//28052920
chr11:46812065-46812066(-) m6A CDS       24981863//28052920
chr11:46812072-46812073(-) m6A CDS       24981863//28052920
chr11:46812106-46812107(-) m6A CDS       24981863//28052920//22575960
chr11:46817170-46817171(-) m6A CDS       24981863
chr11:46817176-46817177(-) m6A CDS       24981863
chr11:46817192-46817193(-) m6A CDS       24981863
chr11:46817201-46817202(-) m6A CDS       24981863
chr11:46817232-46817233(-) m6A CDS       24981863
chr11:46817248-46817249(-) m6A CDS       24981863
chr11:46818363-46818364(-) Am CDS       -
chr11:46829625-46829626(-) m6A CDS       24981863//27773535
chr11:46829632-46829633(-) m6A CDS       24981863//27773535
chr11:46830965-46830966(-) m6A CDS       24981863//27773535
chr11:46830976-46830977(-) m6A CDS       24981863//27773535
chr11:46842731-46842732(-) m6A CDS//exon       27371828
chr11:46842755-46842756(-) m6A CDS//exon       24981863//27371828
chr11:46842794-46842795(-) m6A 5'UTR//exon       24981863//27371828
chr11:46848347-46848348(-) m6A 5'UTR//intron       24284625//24981863//27371828
chr11:46867844-46867845(-) m6A 5'UTR//exon       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CKAP5
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Insoluble cytoplasm K562 cells     -
Membrane K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-6
Interactor2: CKAP5

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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