Detail Information

Basic Information:


  VIRBase ID:  

VHID00051834

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-6 EIF3G
miRBase
Accession/Entrez ID		 zikv-mir-6 8666
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - eIF3-delta//EIF3-P42//eIF3-p44//EIF3S4

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR EIF3G
chr19:10228509(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase EIF3G
chr19:10225742-10225743(-) m6A 3'UTR//exon       27773535//22575960
chr19:10225759-10225760(-) m6A 3'UTR//exon       24284625//27773535//22575960
chr19:10226376-10226377(-) m6A CDS//exon       24284625//27773535//27371828//27773536//22575960
chr19:10226381-10226382(-) m6A CDS//exon       27773535//27371828//27773536//22575960
chr19:10226442-10226443(-) m6A CDS//exon       27773535//27371828//27773536//22575960
chr19:10226453-10226454(-) m6A CDS//exon       27773535//27371828//27773536//22575960
chr19:10226717-10226718(-) m6A CDS//exon       24981863//27773535//27371828//27773536//22575960
chr19:10226722-10226723(-) m6A CDS//exon       24981863//27773535//27371828//27773536//22575960
chr19:10226773-10226774(-) m6A exon//intron       24981863//27773535//27371828//27773536
chr19:10227069-10227070(-) m6A exon//intron       -
chr19:10227574-10227575(-) m6A 3'UTR//CDS//exon       24981863//27773535//27371828//27773536
chr19:10227630-10227631(-) m6A 3'UTR//CDS//exon       24981863//27773535//27371828//27773536//22575960
chr19:10227639-10227640(-) m6A 3'UTR//CDS//exon       24981863//27773535//27371828//27773536//22575960
chr19:10227657-10227658(-) m6A 3'UTR//CDS//exon       24981863//27773535//27371828//27773536//22575960
chr19:10227822-10227823(-) m6A 3'UTR//CDS//exon//intron       24981863//27773535//27371828//27773536//22575960
chr19:10227844-10227845(-) m6A 3'UTR//CDS//exon//intron       24981863//27773535//27371828//27773536//22575960
chr19:10227862-10227863(-) m6A 3'UTR//CDS//exon//intron       24981863//27773535//27371828//27773536
chr19:10227913-10227914(-) m6A exon//intron       24981863//27773535//27371828//27773536
chr19:10227959-10227960(-) m6A exon//intron       27773535
chr19:10229236-10229237(-) m6A intron       27773535
chr19:10229286-10229287(-) m6A intron       27773535
chr19:10229299-10229300(-) m6A intron       27773535
chr19:10229378-10229379(-) m6A 3'UTR//CDS//exon       24981863//27773535
chr19:10229587-10229588(-) m6A 3'UTR//CDS//exon       24981863//27773535
chr19:10229595-10229596(-) m6A 3'UTR//CDS//exon       24981863//27773535
chr19:10229731-10229732(-) m6A exon//intron       24981863
chr19:10229752-10229753(-) m6A 3'UTR//exon//intron       24981863
chr19:10229846-10229847(-) m6A 3'UTR//CDS//exon       24981863//27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate EIF3G
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -
Nucleolus K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -
Ribosome HEK-293 cells     22199352
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-6
Interactor2: EIF3G

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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