Detail

Basic Information:

VIRBase ID:

VHID00051832

Virus:

Zika virus (ZIKV)

Host:

Homo sapiens

Confidence Score:

0.1828

Interaction Type:

Virus-Host interaction

Interactor Information:

	Interactor1	Interactor2
Symbol	zikv-mir-6	EIF3D
miRBase Accession/Entrez ID	zikv-mir-6	8664
Organism	Zika virus (ZIKV)	Homo sapiens
Category	miRNA	mRNA
Alias	-	eIF3-p66//eIF3-zeta//EIF3S7

RNA Editing:

Resource

Symbol

Editing Position

Change

Genetic Region

RADAR

EIF3D

chr22:36909543(-)	A-I	intronic
chr22:36913989(-)	A-I	intronic
chr22:36913966(-)	A-I	intronic
chr22:36914498(-)	A-I	intronic
chr22:36909548(-)	A-I	intronic
chr22:36913968(-)	A-I	intronic
chr22:36913932(-)	A-I	intronic
chr22:36911513(-)	A-I	intronic
chr22:36911512(-)	A-I	intronic
chr22:36911492(-)	A-I	intronic
chr22:36911443(-)	A-I	intronic
chr22:36911435(-)	A-I	intronic
chr22:36911431(-)	A-I	intronic
chr22:36911393(-)	A-I	intronic
chr22:36909577(-)	A-I	intronic
chr22:36909525(-)	A-I	intronic
chr22:36909482(-)	A-I	intronic
chr22:36909446(-)	A-I	intronic
chr22:36909379(-)	A-I	intronic
chr22:36909354(-)	A-I	intronic
chr22:36913841(-)	A-I	intronic
chr22:36914333(-)	A-I	intronic
chr22:36913910(-)	A-I	intronic
chr22:36914009(-)	A-I	intronic
chr22:36913977(-)	A-I	intronic
chr22:36914020(-)	A-I	intronic
chr22:36914381(-)	A-I	intronic
chr22:36911573(-)	A-I	intronic
chr22:36914294(-)	A-I	intronic
chr22:36914067(-)	A-I	intronic
chr22:36913971(-)	A-I	intronic
chr22:36923631(-)	A-I	intronic
chr22:36913824(-)	A-I	intronic
chr22:36909582(-)	A-I	intronic
chr22:36914436(-)	A-I	intronic
chr22:36911488(-)	A-I	intronic
chr22:36914424(-)	A-I	intronic
chr22:36909870(-)	A-I	intronic
chr22:36914320(-)	A-I	intronic
chr22:36913906(-)	A-I	intronic
chr22:36911475(-)	A-I	intronic
chr22:36914388(-)	A-I	intronic
chr22:36913847(-)	A-I	intronic
chr22:36909862(-)	A-I	intronic
chr22:36914474(-)	A-I	intronic
chr22:36911319(-)	A-I	intronic
chr22:36911413(-)	A-I	intronic
chr22:36911331(-)	A-I	intronic
chr22:36913919(-)	A-I	intronic
chr22:36913972(-)	A-I	intronic
chr22:36909631(-)	A-I	intronic
chr22:36914522(-)	A-I	intronic
chr22:36913825(-)	A-I	intronic
chr22:36914458(-)	A-I	intronic
chr22:36922769(-)	A-I	intronic
chr22:36913965(-)	A-I	intronic
chr22:36911572(-)	A-I	intronic
chr22:36913963(-)	A-I	intronic
chr22:36914370(-)	A-I	intronic
chr22:36909452(-)	A-I	intronic
chr22:36914414(-)	A-I	intronic
chr22:36911372(-)	A-I	intronic
chr22:36914453(-)	A-I	intronic
chr22:36913973(-)	A-I	intronic
chr22:36909532(-)	A-I	intronic

Resource

Symbol

Editing Position

Change

SeqReg

exReg

PMID

DARNED

EIF3D

chr22:36913825(-)	A-I	intron	-	22327324
chr22:36913974(-)	A-I	intron	-	22327324
chr22:36913977(-)	A-I	intron	-	22327324
chr22:36914381(-)	A-I	intron	-	22327324
chr22:36914522(-)	A-I	intron	-	22327324
chr22:36909792(-)	A-G	intron	-	22484847
chr22:36911572(-)	A-G	intron	-	22484847
chr22:36911573(-)	A-G	intron	-	22484847
chr22:36913825(-)	A-G	intron	-	22484847
chr22:36913965(-)	A-G	intron	-	22484847
chr22:36913971(-)	A-G	intron	-	22484847
chr22:36913972(-)	A-G	intron	-	22484847
chr22:36913973(-)	A-G	intron	-	22484847
chr22:36913974(-)	A-G	intron	-	22484847
chr22:36913977(-)	A-G	intron	-	22484847
chr22:36914020(-)	A-G	intron	-	22484847
chr22:36914381(-)	A-G	intron	-	22484847
chr22:36914436(-)	A-G	intron	-	22484847
chr22:36914522(-)	A-G	intron	-	22484847

RNA Modification:

Resource

Symbol

ModificationPosition

Type

Genomic Context

PMID

RMBase

EIF3D

chr22:36906994-36906995(-)	m6A	3'UTR//exon	-
chr22:36907032-36907033(-)	m6A	3'UTR//exon	-
chr22:36907038-36907039(-)	m6A	3'UTR//CDS//exon	-
chr22:36907099-36907100(-)	m6A	3'UTR//intron	-
chr22:36907139-36907140(-)	m6A	3'UTR//intron	-
chr22:36907650-36907651(-)	m6A	CDS//exon	27773535//22575960
chr22:36907806-36907807(-)	m6A	3'UTR//CDS//exon	22575960
chr22:36908614-36908615(-)	m6A	3'UTR//CDS//exon	22575960
chr22:36912939-36912940(-)	m6A	exon//intron	26404942
chr22:36913457-36913458(-)	m6A	3'UTR//CDS	26404942//27773535
chr22:36913477-36913478(-)	m6A	CDS	27773535
chr22:36914823-36914824(-)	m6A	CDS	27773535
chr22:36914843-36914844(-)	m6A	CDS	27773535
chr22:36914947-36914948(-)	m6A	CDS	27773535
chr22:36916625-36916626(-)	m6A	CDS	26404942//27773535
chr22:36916724-36916725(-)	m6A	CDS	27773535
chr22:36916732-36916733(-)	m6A	CDS	24981863//27773535
chr22:36919294-36919295(-)	m6A	CDS//exon	24981863//27773535//22575960
chr22:36919952-36919953(-)	m6A	CDS//exon	24981863//26404942//27773535//22575960
chr22:36919995-36919996(-)	m6A	CDS//exon	24981863//26404942//27773535//22575960
chr22:36920010-36920011(-)	m6A	CDS//exon	24981863//26404942//27773535//22575960
chr22:36920022-36920023(-)	m6A	CDS//exon	24981863//26404942//27773535//22575960
chr22:36921727-36921728(-)	Am	CDS//exon	-
chr22:36921743-36921744(-)	m6A	CDS//exon	27773535
chr22:36921748-36921749(-)	m6A	CDS//exon	27773535
chr22:36921804-36921805(-)	m6A	exon//intron	-
chr22:36921853-36921854(-)	m6A	exon//intron	-
chr22:36921865-36921866(-)	m6A	exon//intron	-
chr22:36922136-36922137(-)	m6A	CDS//exon	24981863//27773535
chr22:36922942-36922943(-)	m6A	5'UTR//intron	24981863
chr22:36924805-36924806(-)	m6A	5'UTR//intron	24981863
chr22:36925037-36925038(-)	m6A	5'UTR//intron	24981863
chr22:36925072-36925073(-)	m6A	5'UTR//intron	24981863

RNA Localization:

Resource

Symbol

Subcellular Localization

Tissue or Cell Line

PMID

RNALocate

EIF3D

Chromatin	K562 cells	-
Exosome	Blood	-
Nucleolus	K562 cells	-
Nucleoplasm	K562 cells	-
Nucleus	HeLa-S3 cells\|K562 cells	-
Ribosome	Colon cancer cells	24393600

Interaction Network (The top 100 interactions):

Interactor1: zikv-mir-6

Interactor2: EIF3D

Evidence Support:

Prediction-Evidence	miRanda
Support Database	ZIKV-CDB

Basic Information:

VIRBase ID:

Virus:

Host:

Confidence Score:

Interaction Type:

Interactor Information:

RNA Editing:

RNA Modification:

RNA Localization:

Interaction Network (The top 100 interactions):

Evidence Support:

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