Detail Information

Basic Information:


  VIRBase ID:  

VHID00051394

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-6 RASA2
miRBase
Accession/Entrez ID		 zikv-mir-6 5922
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - GAP1M

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR RASA2
chr3:141237164(+) A-I      intronic
chr3:141263565(+) A-I      intronic
chr3:141263583(+) A-I      intronic
chr3:141263584(+) A-I      intronic
chr3:141263590(+) A-I      intronic
chr3:141263593(+) A-I      intronic
chr3:141263599(+) A-I      intronic
chr3:141263608(+) A-I      intronic
chr3:141263613(+) A-I      intronic
chr3:141263615(+) A-I      intronic
chr3:141237149(+) A-I      intronic
chr3:141235709(+) A-I      intronic
chr3:141263638(+) A-I      intronic
chr3:141263640(+) A-I      intronic
chr3:141264960(+) A-I      intronic
chr3:141208746(+) A-I      intronic
chr3:141208743(+) A-I      intronic
chr3:141307758(+) A-I      intronic
chr3:141322656(+) A-I      intronic
chr3:141237198(+) A-I      intronic
chr3:141237175(+) A-I      intronic
chr3:141237174(+) A-I      intronic
chr3:141237173(+) A-I      intronic
chr3:141237172(+) A-I      intronic
chr3:141237167(+) A-I      intronic
chr3:141263619(+) A-I      intronic
chr3:141304459(+) A-I      intronic
chr3:141306298(+) A-I      intronic
chr3:141306299(+) A-I      intronic
chr3:141306561(+) A-I      intronic
chr3:141307933(+) A-I      intronic
chr3:141307745(+) A-I      intronic
chr3:141308572(+) A-I      intronic
chr3:141308568(+) A-I      intronic
chr3:141308540(+) A-I      intronic
chr3:141308536(+) A-I      intronic
chr3:141308530(+) A-I      intronic
chr3:141236623(+) A-I      intronic
chr3:141307748(+) A-I      intronic
chr3:141307763(+) A-I      intronic
chr3:141238960(+) A-I      intronic
chr3:141216639(+) A-I      intronic
chr3:141235671(+) A-I      intronic
chr3:141238956(+) A-I      intronic
chr3:141237312(+) A-I      intronic
chr3:141237304(+) A-I      intronic
chr3:141304455(+) A-I      intronic
chr3:141302997(+) A-I      intronic
chr3:141294889(+) A-I      intronic
chr3:141294879(+) A-I      intronic
chr3:141289297(+) A-I      intronic
chr3:141289284(+) A-I      intronic
chr3:141289271(+) A-I      intronic
chr3:141285996(+) A-I      intronic
chr3:141280969(+) A-I      intronic
chr3:141280931(+) A-I      intronic
chr3:141280895(+) A-I      intronic
chr3:141280818(+) A-I      intronic
chr3:141262813(+) A-I      intronic
chr3:141256490(+) A-I      intronic
chr3:141256480(+) A-I      intronic
chr3:141256349(+) A-I      intronic
chr3:141255667(+) A-I      intronic
chr3:141244564(+) A-I      intronic
chr3:141237266(+) A-I      intronic
chr3:141237231(+) A-I      intronic
chr3:141237214(+) A-I      intronic
chr3:141237210(+) A-I      intronic
chr3:141237160(+) A-I      intronic
chr3:141237141(+) A-I      intronic
chr3:141237131(+) A-I      intronic
chr3:141237117(+) A-I      intronic
chr3:141320008(+) A-I      intronic
chr3:141320070(+) A-I      intronic
chr3:141237112(+) A-I      intronic
chr3:141237109(+) A-I      intronic
chr3:141237104(+) A-I      intronic
chr3:141237073(+) A-I      intronic
chr3:141236682(+) A-I      intronic
chr3:141236679(+) A-I      intronic
chr3:141236625(+) A-I      intronic
chr3:141244223(+) A-I      intronic
chr3:141239052(+) A-I      intronic
chr3:141235696(+) A-I      intronic
chr3:141307764(+) A-I      intronic
chr3:141307783(+) A-I      intronic
chr3:141307784(+) A-I      intronic
chr3:141307813(+) A-I      intronic
chr3:141307823(+) A-I      intronic
chr3:141307841(+) A-I      intronic
chr3:141314691(+) A-I      intronic
chr3:141314500(+) A-I      intronic
chr3:141312123(+) A-I      intronic
chr3:141312117(+) A-I      intronic
chr3:141312029(+) A-I      intronic
chr3:141312024(+) A-I      intronic
chr3:141311994(+) A-I      intronic
chr3:141311983(+) A-I      intronic
chr3:141311970(+) A-I      intronic
chr3:141308668(+) A-I      intronic
chr3:141308589(+) A-I      intronic
chr3:141317669(+) A-I      intronic
chr3:141237218(+) A-I      intronic
chr3:141237051(+) A-I      intronic
chr3:141237178(+) A-I      intronic
chr3:141280826(+) A-I      intronic
chr3:141289163(+) A-I      intronic
chr3:141303008(+) A-I      intronic
chr3:141307961(+) A-I      intronic
chr3:141227359(+) A-I      intronic
chr3:141317768(+) A-I      intronic
chr3:141235836(+) A-I      intronic
chr3:141316028(+) A-I      intronic
chr3:141237079(+) A-I      intronic
chr3:141274048(+) A-I      intronic
chr3:141256356(+) A-I      intronic
chr3:141237074(+) A-I      intronic
chr3:141216629(+) A-I      intronic
chr3:141293071(+) A-I      intronic
chr3:141293096(+) A-I      intronic
chr3:141225599(+) A-I      intronic
chr3:141235813(+) A-I      intronic
chr3:141320212(+) A-I      intronic
chr3:141306368(+) A-I      intronic
chr3:141237313(+) A-I      intronic
chr3:141306276(+) A-I      intronic
chr3:141280819(+) A-I      intronic
chr3:141308482(+) A-I      intronic
chr3:141237163(+) A-I      intronic
chr3:141281308(+) A-I      intronic
chr3:141225699(+) A-I      intronic
chr3:141280960(+) A-I      intronic
chr3:141308436(+) A-I      intronic
chr3:141308481(+) A-I      intronic
chr3:141281041(+) A-I      intronic
chr3:141312019(+) A-I      intronic
chr3:141281318(+) A-I      intronic
chr3:141322171(+) A-I      intronic
chr3:141237285(+) A-I      intronic
chr3:141307943(+) A-I      intronic
chr3:141322135(+) A-I      intronic
chr3:141286003(+) A-I      intronic
chr3:141307689(+) A-I      intronic
chr3:141314710(+) A-I      intronic
chr3:141237140(+) A-I      intronic
chr3:141237150(+) A-I      intronic
chr3:141298886(+) A-I      intronic
chr3:141237253(+) A-I      intronic
chr3:141329466(+) A-I      intronic
chr3:141237151(+) A-I      intronic
chr3:141320148(+) A-I      intronic
chr3:141242239(+) A-I      intronic
chr3:141242218(+) A-I      intronic
chr3:141306304(+) A-I      intronic
chr3:141320060(+) A-I      intronic
chr3:141308562(+) A-I      intronic
chr3:141237204(+) A-I      intronic
chr3:141236635(+) A-I      intronic
chr3:141273825(+) A-I      intronic
chr3:141256355(+) A-I      intronic
chr3:141314571(+) A-I      intronic
chr3:141314693(+) A-I      intronic
chr3:141244240(+) A-I      intronic
chr3:141307955(+) A-I      intronic
chr3:141237169(+) A-I      intronic
chr3:141237234(+) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED RASA2
chr3:141235714(+) A-I intron -    21960545
chr3:141235733(+) A-I intron -    21960545
chr3:141248907(+) A-I intron -    21960545
chr3:141280931(+) A-I intron -    21960545
chr3:141263560(+) A-G intron -    22484847
chr3:141315952(+) A-G intron -    22484847
chr3:141315958(+) A-G intron -    22484847
chr3:141235768(+) A-G intron -    22484847
chr3:141235813(+) A-G intron -    22484847
chr3:141237178(+) A-G intron -    22484847
chr3:141256355(+) A-G intron -    22484847
chr3:141256356(+) A-G intron -    22484847
chr3:141262787(+) A-G intron -    22484847
chr3:141280819(+) A-G intron -    22484847
chr3:141280826(+) A-G intron -    22484847
chr3:141280924(+) A-G intron -    22484847
chr3:141280960(+) A-G intron -    22484847
chr3:141308423(+) A-G intron -    22484847
chr3:141308481(+) A-G intron -    22484847
chr3:141308482(+) A-G intron -    22484847
chr3:141320084(+) T-C intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase RASA2
chr3:141304893-141304894(+) m6A CDS//exon       24981863
chr3:141305515-141305516(+) m6A CDS//exon       24981863
chr3:141328749-141328750(+) m6A CDS//exon       24981863
chr3:141328813-141328814(+) m6A CDS//exon       24981863//22608085
chr3:141328854-141328855(+) m6A CDS       24981863//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate RASA2
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-6
Interactor2: RASA2

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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