Detail Information

Basic Information:


  VIRBase ID:  

VHID00050508

  Virus:  

Zika virus (ZIKV)

  Host:  

Homo sapiens

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol zikv-mir-6 BIRC5
miRBase
Accession/Entrez ID		 zikv-mir-6 332
Organism Zika virus (ZIKV) Homo sapiens
Category miRNA mRNA
Alias - API4//EPR-1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR BIRC5
chr17:76215289(+) A-I      intronic
chr17:76217471(+) A-I      intronic
chr17:76217433(+) A-I      intronic
chr17:76216322(+) A-I      intronic
chr17:76218260(+) A-I      intronic
chr17:76218625(+) A-I      intronic
chr17:76218626(+) A-I      intronic
chr17:76218658(+) A-I      intronic
chr17:76213087(+) A-I      intronic
chr17:76218696(+) A-I      intronic
chr17:76213090(+) A-I      intronic
chr17:76215476(+) A-I      intronic
chr17:76213141(+) A-I      intronic
chr17:76213086(+) A-I      intronic
chr17:76213707(+) A-I      intronic
chr17:76213717(+) A-I      intronic
chr17:76213840(+) A-I      intronic
chr17:76213942(+) A-I      intronic
chr17:76213947(+) A-I      intronic
chr17:76213973(+) A-I      intronic
chr17:76218175(+) A-I      intronic
chr17:76218161(+) A-I      intronic
chr17:76216255(+) A-I      intronic
chr17:76216521(+) A-I      intronic
chr17:76213785(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase BIRC5
chr17:76210298-76210299(+) m6A 5'UTR       24981863
chr17:76210369-76210370(+) m6A 5'UTR       24284625//24981863//22575960
chr17:76210443-76210444(+) m6A CDS       24284625//24981863//22575960
chr17:76210467-76210468(+) m6A CDS//exon       24284625//24981863//22575960
chr17:76210806-76210807(+) m6A CDS//exon       22575960
chr17:76212831-76212832(+) m6A 3'UTR//CDS//exon//intron       24981863//27773535
chr17:76212836-76212837(+) m6A 3'UTR//CDS//exon//intron       24981863//27773535
chr17:76212854-76212855(+) m6A 3'UTR//CDS//exon//intron       24981863//27773535
chr17:76218960-76218961(+) m6A 3'UTR//exon//intron       24981863//27773535
chr17:76219024-76219025(+) m6A 3'UTR//exon//intron       24981863
chr17:76219045-76219046(+) m6A 3'UTR//exon//intron       24981863
chr17:76219554-76219555(+) m6A 3'UTR//CDS//exon       24981863
chr17:76220195-76220196(+) m6A 3'UTR       27773535
chr17:76220275-76220276(+) m6A 3'UTR       24981863//26404942//27773535
chr17:76220287-76220288(+) m6A 3'UTR       24981863//26404942//27773535
chr17:76220330-76220331(+) m6A 3'UTR       24981863//26404942//27773535
chr17:76220349-76220350(+) m6A 3'UTR       24981863//26404942//27773535
chr17:76220410-76220411(+) m6A 3'UTR       24981863//26404942//27773535
chr17:76220511-76220512(+) m6A 3'UTR       24284625//24981863//22575960
chr17:76220725-76220726(+) m6A 3'UTR       24284625
chr17:76220779-76220780(+) m6A 3'UTR       24284625//24209618//24981863
chr17:76220791-76220792(+) m6A 3'UTR       24284625//24209618//24981863
chr17:76220863-76220864(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr17:76220931-76220932(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085
chr17:76220938-76220939(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085
chr17:76220974-76220975(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr17:76220995-76220996(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr17:76221035-76221036(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr17:76221049-76221050(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085
chr17:76221596-76221597(+) m6A 3'UTR       24981863
chr17:76221622-76221623(+) m6A 3'UTR       24981863//22608085
chr17:76221635-76221636(+) m6A 3'UTR       24981863//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate BIRC5
Chromatin K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells     -
Ribosome HEK-293 cells     22199352
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: zikv-mir-6
Interactor2: BIRC5

Evidence Support:


Prediction-Evidence miRanda
Support Database ZIKV-CDB

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